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Name : PC1_0600 (PC1_0600) Accession : YP_003016191.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 699490 - 700818 bp Length : 1329 bp Strand : + Note : KEGG: eca:ECA0728 thymidine phosphorylase; TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like DNA sequence : TTGTTTCTGATTCAGGAAATTATTCGTAAGAAGCGTGACGGAAAAGCGCTAAGCGAAGAAGAGATCCGCTTCTTTATCAA CGGTATTCGTGACAATACCGTCTCTGAAGGCCAGATCGCGGCACTGGCGATGACCATTTATTTTCATGACATGTCGATGG ATGAACGTGTGGCGCTGACGCTGGCGATGCGTGATTCCGGTACGGTACTGGACTGGAAGAGTTTGAACCTGAACGGCCCG CTGGTGGACAAACACTCTACCGGCGGCGTGGGTGATGTCACTTCGCTGATGCTGGGGCCGATGGTCGCTGCCTGCGGGGG ATACGTTCCGATGATTTCTGGGCGTGGCTTGGGACATACCGGTGGCACGCTAGATAAGCTCGAAGCGATTCCGGGATTGG ATATCTTCCCGAACGATGACGATTTTCGTCGCATCATCCAGCAGGTCGGCGTCGCGATTATTGGGCAGACCTCCTCGCTG GCTCCGGCGGATAAGCGCTTTTACGCCACGCGTGACATTACCGCCACGGTCGACTCCATCCCGCTCATTACCGCGTCGAT TCTGGCGAAGAAGCTGGCTGAAGGGCTGGATGCGTTGGTGATGGACGTCAAAGTGGGGTCTGGGGCGTTTATGCCGACCT ACGCGCTGTCCGAACAGCTGGCGCAGGCGATTGTCGGCGTAGCGAATAACGCGGGATGCCGCACCAGTGCACTGCTGACG GACATGAATCAGGTGCTGGCTTCTAGCGCGGGTAATGCGCTGGAAGTGCGGGAAGCCGTACGTTTCCTGACGGGAGAGAG CCGCAATCCGCGTCTGTATGATGTTACTATGGCGCTCTGTGGCGAGATGCTACTGGCGGGTGGGCTGGCAAGTTCGGCAG ACGACGCGCATTCACGCCTGCAGGCGGTGTTGGATAACGGCAAAGCCGCTGAAGTCTTTGGTCGCATGGTGGCCGCACAG CGCGGCCCAGGTGATTTTGTCGAACACTACGATCGCTACCTGCCGGTGGCGACATTGAGTAAGCCAGTGTTCGCGACGCG GGAAGGTATCGTGACGGCGATGGACACCCGCGCGCTGGGCATGGCAGTCGTATCGCTGGGCGGCGGACGCCGTCAGGCTA CCGATACGATCGATTACAGCGTCGGTCTGGATAGCATGATCAGCCTGGGTGAGCGCGTTGACGCGCAGCGCCCGCTGGCG GTGATCCATGCCAATACGGAAGCGCAATGGCAGCAGGCGGCGAATGACGTTCGCGCCGCAATCCAACTGGGTGACACGGC ACCAGAAAAGACCCCGATGGTCTATCGCCGGGTGAGCGCGGAAGCGTGA Protein sequence : MFLIQEIIRKKRDGKALSEEEIRFFINGIRDNTVSEGQIAALAMTIYFHDMSMDERVALTLAMRDSGTVLDWKSLNLNGP LVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLDKLEAIPGLDIFPNDDDFRRIIQQVGVAIIGQTSSL APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYALSEQLAQAIVGVANNAGCRTSALLT DMNQVLASSAGNALEVREAVRFLTGESRNPRLYDVTMALCGEMLLAGGLASSADDAHSRLQAVLDNGKAAEVFGRMVAAQ RGPGDFVEHYDRYLPVATLSKPVFATREGIVTAMDTRALGMAVVSLGGGRRQATDTIDYSVGLDSMISLGERVDAQRPLA VIHANTEAQWQQAANDVRAAIQLGDTAPEKTPMVYRRVSAEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 1e-63 | 41 |
