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Name : PC1_0053 (PC1_0053) Accession : YP_003015651.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : type VI secretion system Vgr family protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 61325 - 63178 bp Length : 1854 bp Strand : - Note : TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 putative rhs accessory genetic element DNA sequence : ATGGCAAACAGTACAGGATTACAGTTCACCGTTAAGGTCGGCGCATTGCCTGCGTCGACCTTTGCCGTGGTGGATTTTCA GCTCAGCGAGGCGCTCAACCAGCCGTTTGCCCTGTCGCTGAATCTGGCCAGCCCCTTACCGGGGATCGATTTTGGTGCGG TTCTCGACCAGCCCTGCGAACTCCTGGTGTGGTACGAAGGTGAACTCCAAAGACGAGTGAGCGGTATTGTCAGCGCGTTT GCGCAGGGCGATACCGGCTTTCGCCGCACACGCTATCAGGCAGAAGTCCGTCCGACTCTGTGGCGTTTGGGGCTACGTAC CAATGCTCGTATATTTCAGGCGCAGAAGCCTGAGGCAATTATCGGCGCCCTGCTGGAAGAAGCGGGCATCACCGACTACG CCTTTGCGCTGCGCAACGAGCACGCAGTGCGGGAATATTGCGTGCAGTACCGCGAAAGCGATTTGGCCTTTATTGCCCGA CTGGCTGCCGAAGAAGGCCTGTTCTTCTTCCATGAGTTTGAGGAAGGCAAACACCGCGTCGTCTTTGCCGACGATGCAGG CGCGTTGGCAAAAGGCCCTGAGCTGTTTTTCAACCTGGCGACACAGGGGCTGAGTGAAGGCGCATACGTGCGTCGTTTCC GCTATGCCGAGGCGGTGAGCACAGCAGAAGTCGCACTCAAAGACTACAGCTTCAAAACCCCAGCCTATGGCCTGTTGCAC CAGAAAATCAGCGGAGAACTGGAACACCAGCGCGAAAGTTACCAACACTTCGACTACCCCGGTCGTTTTAAACAAGATCC GAGCGGTAAAGCCTTTACCGGCTATCGGCTGGATGCACTGCGAGCAGGGGCGATGACCGGCTCGGGCGAATCGAATGCCG CTGAACTGATGCCGGGCAGCAGTTTCACCTTAACCGAACACCCCAATCTGGCACTCAATATCGGCTGGCAGTTGGTCGCC ATCACCCACAGCGGGCAGCAGCCGCAGGCGCTGGAAGAGGAAAGCGGCGGCGAACCGACCACCTACAGCAACAGCTTTGA AGTTGTGAAAGCTAGCACGACCTGGCGCGCCGACCTGCCCTACAAACCAATGGTAGACGGCCCGCAGATCGCCACCGTCG TCGGCCCGGCGGGTGAAGAAATTTACTGCGACCAGTACGGCAGGGTGAAACTGCAATTCCCGTGGGACCGCTACGGCGCA AGCGATGACCAGAGCTCCTGCTGGGTACGCGTCAGCCAGGGTTGGGCAGGCGGCCAATATGGCCTGATCGCTATCCCGCG CATCGGCCATGAGGTCATCGTCAGCTTCCTCGAAGGCGACCCGGATCAGCCCATCGTGACGGGCAGAACCTTCCACGCCA CCAATCCCTCACCCTACCCGCTACCCGCCAACAAAACGCGCACGACACTGCGCACCACGACCCATAAAGGCGCCGGGTTC AACGAACTGCGCTTTGAGGATCAGGCTGGTCAGGAAGAAGTGTTTATCCATGCCCAGAAGGACATGAACACCGTGGTGCT GAATAACCGCAGTACATCGGTGAATGTGGATCACAACGAAAACATTGGCCGCGATCAGACTGTCGTCGTGCAGCAAAACC AGACGGTTTCTGTTATTGCCGATCAGGTTACCGAGATCCAAGGGGAGCAGACGGTGGTGGTGAAGAAAAACCGAAGCACC GTCGTGGAAGACAATGAAACGCTGAGAGTGACAAACAACATCTTTATCCACGCCGAAGATGGCAGCATTCAGATTGGTAC GGGTGCGGGCTATATCTCAATCAAGCACAGCGGGGATATTGAGATCGTCGGGAATAACCTGACGCTGAACGGCACCCGTA TCGATTTGAATTAA Protein sequence : MANSTGLQFTVKVGALPASTFAVVDFQLSEALNQPFALSLNLASPLPGIDFGAVLDQPCELLVWYEGELQRRVSGIVSAF AQGDTGFRRTRYQAEVRPTLWRLGLRTNARIFQAQKPEAIIGALLEEAGITDYAFALRNEHAVREYCVQYRESDLAFIAR LAAEEGLFFFHEFEEGKHRVVFADDAGALAKGPELFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAYGLLH QKISGELEHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGSGESNAAELMPGSSFTLTEHPNLALNIGWQLVA ITHSGQQPQALEEESGGEPTTYSNSFEVVKASTTWRADLPYKPMVDGPQIATVVGPAGEEIYCDQYGRVKLQFPWDRYGA SDDQSSCWVRVSQGWAGGQYGLIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTTLRTTTHKGAGF NELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTSVNVDHNENIGRDQTVVVQQNQTVSVIADQVTEIQGEQTVVVKKNRST VVEDNETLRVTNNIFIHAEDGSIQIGTGAGYISIKHSGDIEIVGNNLTLNGTRIDLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 9e-147 | 52 |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 6e-118 | 45 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 4e-118 | 45 |
