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Name : PC1_4278 (PC1_4278) Accession : YP_003019828.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : glutamate synthase, small subunit Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0493 EC number : - Position : 4840462 - 4842486 bp Length : 2025 bp Strand : - Note : TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA4461 putative oxidoreductase Fe-S binding subunit DNA sequence : ATGAACCGGTTTGTTATTGCCAGTACTCAAGACTGTATGGGGTGCCATGCATGCGAAATCGCCTGTGTCATTTCACACAA CGATGAGCAGTATCCAGATAGCACCACGGTGTTTCAGCCCAGAATCAAGGCATTCAATACGCCAACGTTGCGGGCTGCCG TGACATGTCGCCATTGTGAAGATGCCCCCTGCGCCAGCGTGTGCCCAACACAGGCCTTGATCAGAAAAGACAATAGCATT CAGCTCGTTCAGGAAAAGTGCATTGGCTGTAAAAGCTGTGTGCTGGCTTGCCCGTTCGGTGCGATGTCCATGGTGACAAA TCCCGTGGACAATAGCACTGTCGCCCATAAGTGCGATCTCTGCGCCGATCGTCCAGAAGGGCAAGCCTGTGTCGCCGCCT GCCCAACACACGCCTTGCAGTTGGTCAGCGAACAAACGTTAGCGGCCCGCCGTCAGGAAAAACAGCAGACGATGGCGCTG CGTTCAGCCTCCCACTGGCAGCGTGAAACACCCGTGCTGAAAGCGCTAACGACCAATCCGCTCAGTAAAAGAAAAAACTG GCCGCGCCGGGATGCTGAGAAAAAGCCGCTGACCCTGAGAACCTCCACGTTTGATGAAATCTATCACGGCTTCTCCGTTC AGCAGACGGAAGATCAGGCTGACCGCTGCCTTTCCTGCGGCAAACGCGCGATCTGCGAGTGGACCTGTCCGCTGCATAAC AATATTCCCGAACTACTAAGTCTCGCGAAACAGGGGCGGATTCTTGAAGCCGTCGAACTCTCACATCAAACCAGCAGCCT GCCAGAAATCTGCGGCCGGGTATGCCCGCAGGATCGACTATGCGAAGGGGCCTGTACACTGGGTAAAGAGTACGGCGCCA TCACCATCGGCAACGTAGAGCGCTACATTACCGATACCGCAATGGCAATGGGCTGGTCGCCCGATATGACGCGTGTCGTT CCCAGCGGCAAACGTGCGGCGATCGTCGGTGCTGGCCCGGCAGGGTTAGCCTGCGCCGATGTGCTCGCGCGCAACGGCGT GCAGGCTGTCGTGTTCGACCGCCACCCGGAAATTGGTGGGCTGCTCACATTCGGGATCCCGTCGTTCAAACTGGATAAAG AGGTGCTGATTCATCGCCGTGAAGTATTCAGCGCGATGGGAATCGAATTCCAGCTGAATACCGAAGTGGGGAAAGATATT TCTCTGGCTCAGCTTCTGGATGACTATGACACCGTTTTCCTCGGCGTAGGCACCTACCGCTCCATGAAGGCTAACATTGA TAATGAAGAGGCTCCCGGCGTCTTCGATGCGCTCCCTTTCCTGATTGCCAATACCAAGCACGTCATGGGACTGCCTGAAT TAGACGACGAGCCTTATATCTCGATGGCGGGCAAGCGCGTCGTGGTGCTCGGCGGTGGAGATACCGCGATGGACTGCCTG CGCACATCCGTTCGACAAGGCGCAGTATCCGTCACCTGCGCATACCGTCGCGATGAAGCGAATATGCCCGGTTCGAAAAA AGAGGTAAAAAATTCCCGTGAAGAAGGCGTGGAGTTCATGTTTAACGTCCAACCACAAAAAATCTGCCTCAATGAACAGG GTGAAGTGTGCGGGATTAGTCTGGTTCGCACTGAACTGGGCGAGCCAGACGCCAGTGGCCGTCGCCGTCCGCGCCCTATT CCCGGTTCAGAATTCGTGCAACCTGCGGAAGCCGTGATAACCGCATTTGGCTTCCAGTCGCACAGCATGCCGTGGCTGGA AGAGGCCGAGATCGGTCTGGATAACTGGGGCTACATCACGGCTCCCCTTAATAATCAGATACCTTGCCAGACCAATCATC CACGTATTTTTGCTGGCGGTGATGCCGTACGCGGTGCCGATCTGGTGGTGACCGCCATTGCCGACGGGCGCAAAGCCGCA CTGGGTATGATTGCGACAATGGGGCTGACCGCCGTCACGGGCGCCATTCCCGCACACCCGCAGCGTCCCGAAACGAACGC AACTCGCGAGGAGGTTCGCTCATGA Protein sequence : MNRFVIASTQDCMGCHACEIACVISHNDEQYPDSTTVFQPRIKAFNTPTLRAAVTCRHCEDAPCASVCPTQALIRKDNSI QLVQEKCIGCKSCVLACPFGAMSMVTNPVDNSTVAHKCDLCADRPEGQACVAACPTHALQLVSEQTLAARRQEKQQTMAL RSASHWQRETPVLKALTTNPLSKRKNWPRRDAEKKPLTLRTSTFDEIYHGFSVQQTEDQADRCLSCGKRAICEWTCPLHN NIPELLSLAKQGRILEAVELSHQTSSLPEICGRVCPQDRLCEGACTLGKEYGAITIGNVERYITDTAMAMGWSPDMTRVV PSGKRAAIVGAGPAGLACADVLARNGVQAVVFDRHPEIGGLLTFGIPSFKLDKEVLIHRREVFSAMGIEFQLNTEVGKDI SLAQLLDDYDTVFLGVGTYRSMKANIDNEEAPGVFDALPFLIANTKHVMGLPELDDEPYISMAGKRVVVLGGGDTAMDCL RTSVRQGAVSVTCAYRRDEANMPGSKKEVKNSREEGVEFMFNVQPQKICLNEQGEVCGISLVRTELGEPDASGRRRPRPI PGSEFVQPAEAVITAFGFQSHSMPWLEEAEIGLDNWGYITAPLNNQIPCQTNHPRIFAGGDAVRGADLVVTAIADGRKAA LGMIATMGLTAVTGAIPAHPQRPETNATREEVRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YP0342 | CAF28571.1 | putative oxidoreductase | Not tested | YAPI | Protein | 0.0 | 58 |
