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Name : PC1_4206 (PC1_4206) Accession : YP_003019756.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : virulence-related outer membrane protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3637 EC number : - Position : 4751829 - 4752377 bp Length : 549 bp Strand : - Note : PFAM: virulence-related outer membrane protein; KEGG: eca:ECA0045 putative virulence-associated outer membrane protein DNA sequence : ATGGAAGATGTTTCGATCATGAAAAAAACAACGCTGCTGCTTTCCACTTTAATTGCTTGTGCCATGGGAATGTCTGTTGC TCAGGCAACACAAACGGTATCTTTGGGTTATGCTCAGGCGAAAGTCGATGACTTTAAAGATCCAAAAGGGATTACCGCAA AATACCATTATCAAGGTGATTCCGATCTCGGCATTATTGGCTCTTTCACTTACCTAGGGGCAAAAGAAGATTATTATGAT CGTGACTTCAACTCCAATGATACGACCAAACTTAAATACTATTCCTTAATGGCTGGACCATCCTACCGTTTTAACGATGT CGTTAGTGTTTATGGTCTAGCGGGTGTTGGTCATGGAAAAGCAGATTGGAAATACGATTACGGCAATTTTGTCGATTCAG GCAGCGAGAAAGAAACCCGCTTTGCTTACGGTGCCGGTATTCAAATTACGCCAGTAGCAAACTGGGCGATTGATATTGGC TACGAAGGCACGAAAATTTATGAAACGCGTGTCGATGCCTTTAATATTGGCGTCGGCTATCGTTTCTGA Protein sequence : MEDVSIMKKTTLLLSTLIACAMGMSVAQATQTVSLGYAQAKVDDFKDPKGITAKYHYQGDSDLGIIGSFTYLGAKEDYYD RDFNSNDTTKLKYYSLMAGPSYRFNDVVSVYGLAGVGHGKADWKYDYGNFVDSGSEKETRFAYGAGIQITPVANWAIDIG YEGTKIYETRVDAFNIGVGYRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pagC | YP_216243.1 | PhoP regulated protein: reduced macrophage survival | Not tested | SPI-11 | Protein | 2e-26 | 42 |
| Z4321 | NP_289546.1 | PagC-like membrane protein | Not tested | OI-122 | Protein | 8e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_4206 | YP_003019756.1 | virulence-related outer membrane protein | VFG0442 | Protein | 1e-25 | 44 |
