Gene Information

Name : PC1_4158 (PC1_4158)
Accession : YP_003019708.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (NAD(+))
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 4691637 - 4693172 bp
Length : 1536 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase; KEGG: eca:ECA0094 aldehyde dehydrogenase B

DNA sequence :
ATGGCGCACGATAATTTTGAAGGCCGAGCCGCATCTGATGAATACGGCTCTCTCAACCTGAAAAAACGCTATGACAATTT
TATCGGCGGAGCCTGGGTTCCACCTGATGCGGGTCAGTATTTTGTCAATTTGACGCCAGTAACGGGTCAGCCGATGTGTG
AAGTGGCCAGTTCGTCAACGCGAGATATTGACCATGCGCTGGATGCCGCGCACAAGGCGAAAGCGGAATGGGGTGGCCTG
TCGGTGCAGGATCGGGCACTGGTGCTGAACCGTATTGCTGACCGAATGGAACAAAACCTTGAGCTTCTGGCGCAGGTGGA
AACCTGGGATAACGGCAAACCGATACGCGAAACCAGCGGAGCGGATGTGCCGCTGGCGATTGATCACTTTCGCTATTTCG
CGGCCTGTATCCGGGCGCAGGAAGGGGCGATCAGTGAAATTGACGGCGATACCGTGGCCTACCATTTTCATGAACCTCTC
GGCGTTGTCGGGCAAATCATTCCCTGGAATTTCCCGCTGCTGATGGCCTGTTGGAAAATGGCGCCTGCGCTGGCCGCCGG
TAACTGTATTGTGCTGAAACCCGCCAAACTGACGCCGATGTCGGTGCTGATTTTGATGGAGCTGATTCAGGATCTGCTAC
CGCCGGGTGTCATTAATGTCGTTAACGGGTCGGGAAGTGAAATTGGTGAATACCTGGCGACGTCGAAACGCGTTGCGAAA
GTTGCTTTCACCGGGTCGACTGAAGTGGGCCAGCAGATCATGAGCTATGCGGCGCAGAACGTGACGCCGGTAACGCTGGA
ACTGGGTGGCAAATCGCCGAATATCTTCTTTGCCGATGTGATGGATAAAGAAGACAGCTTCTTTGACAAAGTGCTCGAAG
GTTTCACGCTGTTTGCCTTCAATCAGGGAGAGGTTTGCACCTGCCCGAGTCGCGCGCTGGTGCAGGAGTCGATCTACGAT
CGCTTTATGGAACGGGCAATCAAGCGCGTTGAGGCTATCCGCATCGGCAATCCGCTGGACAGCAACACCATGATGGGTGC
ACAGGTGTCAGCAGGCCAGCTCGACACCATCCTTAACTACATTGATATCGGTAAGAAAGAGGGCGCACGGGTGCTCACGG
GCGGTCAGCGCAAGGCGATGCCTGGTGGGCTGGCAGAGGGCTACTATCTGGAACCGACGATATTGTTCGGTAAAAACAGT
ATGCGCGTCTTCCAGGAGGAAATTTTTGGACCAGTATTGGCGGTCACGACCTTCAAAACGATGGATGACGCACTGGAGAT
AGCCAACGACACGGAATACGGTCTGGGGGCTGGCGTGTGGAGCCGTAACGGTAACATCGCCTACCGAATGGGGCGCGGTA
TTCAGGCCGGACGCGTCTGGACCAACTGTTATCACGCCTATCCGGCGCATGCGGCGTTCGGGGGTTACAAACAGTCCGGT
ATCGGGCGTGAAAACCATAAAATGATGCTGGAACATTACCAGCAAACCAAGTGCCTGTTGGTGAGTTACTCTGATAAGCC
GATGGGTCTGTTCTAA

Protein sequence :
MAHDNFEGRAASDEYGSLNLKKRYDNFIGGAWVPPDAGQYFVNLTPVTGQPMCEVASSSTRDIDHALDAAHKAKAEWGGL
SVQDRALVLNRIADRMEQNLELLAQVETWDNGKPIRETSGADVPLAIDHFRYFAACIRAQEGAISEIDGDTVAYHFHEPL
GVVGQIIPWNFPLLMACWKMAPALAAGNCIVLKPAKLTPMSVLILMELIQDLLPPGVINVVNGSGSEIGEYLATSKRVAK
VAFTGSTEVGQQIMSYAAQNVTPVTLELGGKSPNIFFADVMDKEDSFFDKVLEGFTLFAFNQGEVCTCPSRALVQESIYD
RFMERAIKRVEAIRIGNPLDSNTMMGAQVSAGQLDTILNYIDIGKKEGARVLTGGQRKAMPGGLAEGYYLEPTILFGKNS
MRVFQEEIFGPVLAVTTFKTMDDALEIANDTEYGLGAGVWSRNGNIAYRMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSG
IGRENHKMMLEHYQQTKCLLVSYSDKPMGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-145 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-151 62
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-151 62
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-151 62
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-150 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_4158 YP_003019708.1 aldehyde dehydrogenase (NAD(+)) VFG0082 Protein 4e-145 63