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Name : PC1_4155 (PC1_4155) Accession : YP_003019705.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 4687450 - 4688772 bp Length : 1323 bp Strand : + Note : KEGG: eca:ECA0097 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel DNA sequence : ATGCAAGCCTATTTTGAACAGATCGAAAAAGTCCGTTATGAAGGTAGCCAAAGCGACAATCCCTTCGCCTTTCGTCACTA CAATCCCGATCAGGAAATTCTTGGGAAACGGATGGCTGACCATTTGCGTTTTGCCGTCGCGTATTGGCACACGTTCTGCT GGAACGGCGCGGATATGTTCGGCGTCGGATCTTTTGCTCGGCCGTGGCAACAGTCAGGCGACGCGCTGGAGCTAGCGAAG CGCAAGGCGGACATCGCATTCGAATTCTTTCAAAAGCTGAGCGTGCCTTACTACTGCTTTCATGACGTCGATATCGCACC GGAAGGAAACTCACTGAAAGAGTATCTGCATAATTTTGCGGTTATCACCGATGTGCTGGCGGAAAAGCAGCAGGATAGCG GCGTGAAGCTGCTGTGGGGCACCGCCAACTGCTTTACCCATCCTCGCTATGGCGCAGGCGCGGCCACCAACCCTGACCCA GATGTCTTTGCCTGGGCGGCTACGCAGGTGTTCACGGCAATGAACGCGACCAAAAAACTGGGTGGCGAGAACTATGTGCT GTGGGGCGGGCGCGAAGGGTATGAAACCCTGCTTAATACCGACCTGCGTCAGGAGCGTGAACAAATCGGCCGCTTCATGC AGATGGTCGTCGAACATAAACACAAAATCGGCTTTCAGGGCACGCTGCTCATCGAGCCGAAGCCACAGGAGCCAACCAAG CACCAGTACGACTACGATGTCGCCACCGTTTATGGTTTCCTGAAACAGTTTGGGCTGGAAAAAGAGATTAAAGTCAACGT GGAAGCCAACCACGCTACGCTGGCAGGCCATTCATTCCATCATGAAATCGCCACCGCTGTCGCACTGGGCGTATTCGGAT CTGTCGATGCGAACCGCGGCGATCCGCAGCTCGGCTGGGACACCGATCAGTTCCCTAACAGCGTGGAAGAGAACACGCTG ATCATGTATGAAATTCTCAAGGCGGGTGGCTTCACGACGGGTGGGCTGAACTTTGACGCAAAAGTTCGTCGCCAAAGCAC CGATCGCTATGACCTTTTCCACGCGCATATCGGCGCGATGGATACAATGGCACTGGCGCTCAAGGCCGCAGCCAGAATGA TTGAAGATGATAAACTCAATCAGTTGGTTGCTAAACGCTATGCAGGCTGGAACGGAGAACTGGGTCAGCAAATCCTGCAA GGCAAGGCTTCGCTGGAATCACTTGCCCACTATGCAGAAAGCCATCAGCTGGCACCACAGCACCAGAGTGGTCAGCAGGA ATTGCTGGAAAACCTGGTTAACCGCCACCTATACCCTAAATAA Protein sequence : MQAYFEQIEKVRYEGSQSDNPFAFRHYNPDQEILGKRMADHLRFAVAYWHTFCWNGADMFGVGSFARPWQQSGDALELAK RKADIAFEFFQKLSVPYYCFHDVDIAPEGNSLKEYLHNFAVITDVLAEKQQDSGVKLLWGTANCFTHPRYGAGAATNPDP DVFAWAATQVFTAMNATKKLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK HQYDYDVATVYGFLKQFGLEKEIKVNVEANHATLAGHSFHHEIATAVALGVFGSVDANRGDPQLGWDTDQFPNSVEENTL IMYEILKAGGFTTGGLNFDAKVRRQSTDRYDLFHAHIGAMDTMALALKAAARMIEDDKLNQLVAKRYAGWNGELGQQILQ GKASLESLAHYAESHQLAPQHQSGQQELLENLVNRHLYPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 2e-109 | 52 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-109 | 52 |
