Gene Information

Name : PC1_4122 (PC1_4122)
Accession : YP_003019672.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : putative transcriptional regulator, Nlp
Function : -
COG functional category : K : Transcription
COG ID : COG3423
EC number : -
Position : 4654106 - 4654363 bp
Length : 258 bp
Strand : -
Note : KEGG: plu:plu4474 hypothetical protein

DNA sequence :
ATGAAAAAGGATTGGCACAAAGCGGATATCATTGCTGCCTTACACAAGAAAAGTACTTCAATGGCCGAGCTTTCACGTTC
TGTAGGTTTGAGTTCGTCAACGCTGGCAAATGTATTAACGCGACCTTGGCCTAAAGGAGAATGGCTGGTTGCAGGTGCAC
TTGGGGTACATCCCGCCGAAATATGGCCGAGCCGTTATTACGATACAGAGGGGAGTTTGCTTGATCGAAAGGTGAAAATA
AGGGGCGATAAGATATAA

Protein sequence :
MKKDWHKADIIAALHKKSTSMAELSRSVGLSSSTLANVLTRPWPKGEWLVAGALGVHPAEIWPSRYYDTEGSLLDRKVKI
RGDKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cII NP_458752.1 transcriptional regulatory protein Not tested SPI-7 Protein 5e-16 65
cII NP_807957.1 transcriptional regulator Not tested SPI-7 Protein 5e-16 65
pln1 AAO17222.1 Pln1 Not tested tcd island Protein 3e-16 65
unnamed AAQ07472.1 Ner-like protein Not tested Not named Protein 1e-15 63