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Name : PC1_4027 (PC1_4027) Accession : YP_003019578.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : Hcp1 family type VI secretion system effector Function : - COG functional category : S : Function unknown COG ID : COG3157 EC number : - Position : 4547225 - 4547704 bp Length : 480 bp Strand : - Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA3672 hypothetical protein DNA sequence : ATGTCGAGTATTATCTATTTAGAGTTGACGGGTGATAAGCAAGGATTAATTTCTTCTGGCTGTTCAACATTACAGTCAAT TGGTAATAGAAGCCAAATTGGTCATGAAGATCAGATTCAGGTGTTAAGTTTAAATCACTCAATGAGTCATGCTGATAATC TATCTTGTCATCCCGTTGAAATAATTAAACTTATCGATAAATCGTCACCATTGCTTGGTGTTTCTACCTCTTCCAATGAA AAGCTAAGTGCAAATTTCTTTTTGTATAGGATAAATGCCGCTGGGCAATTAGAGTTGTTTTATGTCATTAAATTAACAGA TGCCCGCATTGTTGACATTTCTTGTAGTTATCCGCATTCGATTAATGACAATGACGTAATGCCATATGAGAAAGTTTTAT TAAAGTATAACTCCATATCATGGGAACACAAAGTTGCGGGAACATCAGGTTATAGTATCTGGAATGATAGTGGTATTTAG Protein sequence : MSSIIYLELTGDKQGLISSGCSTLQSIGNRSQIGHEDQIQVLSLNHSMSHADNLSCHPVEIIKLIDKSSPLLGVSTSSNE KLSANFFLYRINAAGQLELFYVIKLTDARIVDISCSYPHSINDNDVMPYEKVLLKYNSISWEHKVAGTSGYSIWNDSGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec32 | YP_851413.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 6e-33 | 50 |
| aec32 | AAQ96726.1 | Aec32 | Not tested | AGI-1 | Protein | 4e-33 | 50 |
| orf23 | AAO17189.1 | Orf23 | Not tested | tcd island | Protein | 6e-29 | 47 |
