Gene Information

Name : PC1_3980 (PC1_3980)
Accession : YP_003019531.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 4491087 - 4492028 bp
Length : 942 bp
Strand : +
Note : KEGG: eca:ECA4188 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence : 
ATGTTAGCCAATATTATTAGAATTGCCACCCGACAAAGCCCGCTCGCCCTGTGGCAAGCACGATATGTTCAGCAGTGTCT
GAATCACCTCTACCCGGATTTACACGTGGAGCTGGTGCCGATGGTGACCCGCGGCGACATTATCCTGGATACGCCACTGG
CAAAGGTCGGCGGTAAGGGATTGTTTGTTAAAGAGCTGGAATTGGCGCTGCTTGAAGGGCGCGCTGATATTGCCGTCCAT
TCCATGAAAGATGTGCCCGTCGAATTCCCGGATGGCCTCGGCCTGACTACCATTTGCGAACGCGATGACCCGCGCGACGC
ATTCGTTTCCAACCGTTACGACAGCCTCGAACAATTACCGGAAGGCAGCTGTGTCGGCACATCCAGCCTGCGTCGCCAGT
GTCAGCTGCGCGCCCGACGCCCTGATCTAGTGATTCGTGATTTGCGCGGCAATGTCGGAACGCGTCTGGCAAAACTGGAC
AACGGCGAGTATGACGCCATTATCCTTGCCGTCGCGGGTTTGAAACGCCTCGGCCTTGAAGAACGCATCCGCTGTGCGCT
GAGCCCGGAAGAATCTCTACCTGCCGTCGGACAAGGTGCTATCGGCATCGAATGCCGTTTAAATGACGATCGTATTCGCC
AACTCCTTGCCCCACTCAATCACCCCGCGACCGCTGCCCGCGTCCAGGCTGAACGCGCCATGAATGTGCGCCTTGAAGGT
GGCTGTCAGGTGCCGATTGGCAGCTATGCCGAACTGGAAGGCGATACACTGTGGTTACGTGCGCTGGTTGGCGCCCCGGA
CGGTAGCCAAATGATCGTCGGTGAACGTAGAGGAAACGTCTCCGACGCCGAACAGATCGGCATCGCACTGGCGGAAGAGC
TGTTAGCAAAAGGGGCCAGCGCCATCCTTCAGGCCGTTTATCACGAGTCGAGCTCATCATGA

Protein sequence : 
MLANIIRIATRQSPLALWQARYVQQCLNHLYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLEGRADIAVH
SMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLD
NGEYDAIILAVAGLKRLGLEERIRCALSPEESLPAVGQGAIGIECRLNDDRIRQLLAPLNHPATAARVQAERAMNVRLEG
GCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERRGNVSDAEQIGIALAEELLAKGASAILQAVYHESSSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-83 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-83 61