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Name : PC1_3912 (PC1_3912) Accession : YP_003019463.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 4404519 - 4406852 bp Length : 2334 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: eca:ECA4122 putative RNA binding protein DNA sequence : ATGAATGATTCATTAAGCCACATCATCGCCAGCGAATTGCAGGCGCGTACGGAGCAGGTGGACGCCGCAGTCCGTCTGCT GGATGAAGGAAATACCGTCCCTTTTATCGCCCGTTACCGTAAAGAAGTGACCGGCGGGTTGGATGACACCCAGTTGCGCC AACTCGAAACGCGCCTCGGCTACCTGCGTGAACTGGAAGATCGACGCCAGACTATTCTGAAATCCATCGACGAGCAGGGA AAATTAACCCCACAGCTCGCGACTGCCATTAACGGCACGCTGAGCAAAACCGAGCTGGAAGATCTCTATCTGCCGTATAA ACCTAAGCGCCGCACACGTGGACAAATCGCGATTGAAGCCGGTCTGGAACCGCTGGCCGACGGCCTGTGGCAAGACCCGA GCCAGGATCCAGAGCTGACGGCACAGGCTTATGTCGATGCCGAGAAAGGCGTGGCGGATGTGAAAGCTGCGCTGGATGGC GCACGTTACATCCTGATGGAGCGCTTTGCCGAAGACGCGACGCTGCTGGCAAAAGTACGTAACTACCTGTGGAAAAACGC GCATCTGGTTTCCCGCGTCGTGGAAGGGAAAGAAGAAGAAGGCGCGAAGTTCCGCGACTATTTCGATCATCACGAACCGA TTGCTCAGGTGCCTTCACACCGCGCACTGGCCATGTTCCGTGGACGCAATGAAGGCGTGCTGCAACTGGCGCTGAACGCC GATCCGCAACATGAAGAAGCGCCGCGTGAGAGCTACTGCGAACAAATTATTATCGACCACCTGAACCTGCGTTTGGGTAA TGCGGCAGCGGACAGCTGGCGGCGCGCCGTGATTAGCTGGACGTGGCGCATTAAAGTCCTGCTGCACCTTGAAACCGAAC TGATGGGCAGCGTGCGCGAAAAAGCCGAAGACGAAGCGATCAACGTCTTTGCCCGCAACATGCACGACCTGCTGATGGCC GCGCCGGCGGGCATGCGCGCCACGATGGGTCTCGATCCTGGCCTGCGTACTGGCGTAAAAGTTGCGGTGGTGGATGCCAC TGGCAAGCTGGTCGCGACCGACACGATTTATCCACATACCGGTCAGGCAGCTAAAGCGGCGACGTCAGTGGCCACGCTGT GCCGCAAATATCAGGTTGAGCTGGTGGCGATTGGCAACGGAACCGCCTCACGTGAAACCGAGCGTTTCTTCCTCGATACG CAGAAACAGTTCCCGGATATCAATGCGCAGAAAGTAATCGTCAGCGAAGCTGGCGCGTCGGTGTACTCCGCGTCCGAGCT GGCTGCGCTGGAATTCCCCGATCTGGATGTGTCACTACGCGGCGCGGTGTCCATCGCCCGTCGCTTGCAGGATCCTCTGG CGGAGCTGGTGAAGATCGATCCGAAATCCATCGGCGTTGGTCAGTATCAGCATGACGTGAGCCAAAGCCTGCTGGCGAAG AAACTGGATGCAGTGGTCGAAGACTGCGTAAACGCCGTCGGCGTTGATCTGAACACCGCCTCCGTCGCGCTGCTGACACG TGTTGCAGGGCTGACGCGTATGATGGCGCAAAATATTGTGACCTGGCGTGATGAGAACGGCCGCTTCCACAACCGTGAAC AGTTGCTGAAAGTCAGCCGTCTGGGGCCAAAAGCCTTTGAGCAATGCGCGGGCTTCCTGCGTATTAACCACGGCGATAAC CCGCTGGATGCTTCTACCGTTCACCCGGAAGCCTATCCGGTCGTAGAACGCATTCTGGCCGCGACCGAACAGGCATTGCA GGCGCTGATGGGGAATCCAAACACACTGCGTAACCTGAAACCGGCTGATTTCACCGATGAGCGTTTCGGCGTACCGACGG TGACCGACATCATCAAAGAGCTGGAGAAACCAGGCCGCGATCCGCGCCCTGAGTTCAAAACCGCCAGCTTCGCCGAGGGT GTGGAAACCTTAAACGATCTGCTGCCGGGTATGATTCTGGAAGGTGCGGTCACCAACGTCACCAACTTTGGCGCGTTTGT GGATATCGGCGTTCATCAGGACGGGTTGGTACACATTTCATCACTGGCCGATCATTTCGTTGATGACCCGCACAAGGTCG TGAAAGCGGGCGACATCGTGAAAGTGAAAGTGATGGAAGTGGATCTGCAACGCAAGCGCATCGCGCTGACCATGCGCCTT GATGAGCAACCGGGTGAGACATCATCACGCCGTGGCGGTGGCACAGCTCGCGGTGATAACAACACCTCACCGCGTCAATC GACAGGCAAATCACGTCCTCGTCCAGCGAATACACCAGCTACAGGTAATAGCGCGATGGGTGATGCGTTAGCCGCCGCCT TTAAAAAACGTTAA Protein sequence : MNDSLSHIIASELQARTEQVDAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLGYLRELEDRRQTILKSIDEQG KLTPQLATAINGTLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADGLWQDPSQDPELTAQAYVDAEKGVADVKAALDG ARYILMERFAEDATLLAKVRNYLWKNAHLVSRVVEGKEEEGAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALNA DPQHEEAPRESYCEQIIIDHLNLRLGNAAADSWRRAVISWTWRIKVLLHLETELMGSVREKAEDEAINVFARNMHDLLMA APAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAATSVATLCRKYQVELVAIGNGTASRETERFFLDT QKQFPDINAQKVIVSEAGASVYSASELAALEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSLLAK KLDAVVEDCVNAVGVDLNTASVALLTRVAGLTRMMAQNIVTWRDENGRFHNREQLLKVSRLGPKAFEQCAGFLRINHGDN PLDASTVHPEAYPVVERILAATEQALQALMGNPNTLRNLKPADFTDERFGVPTVTDIIKELEKPGRDPRPEFKTASFAEG VETLNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADHFVDDPHKVVKAGDIVKVKVMEVDLQRKRIALTMRL DEQPGETSSRRGGGTARGDNNTSPRQSTGKSRPRPANTPATGNSAMGDALAAAFKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 61 |
