Gene Information

Name : PC1_3697 (PC1_3697)
Accession : YP_003019248.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : hexulose-6-phosphate isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : 5.1.3.22
Position : 4172570 - 4173430 bp
Length : 861 bp
Strand : +
Note : KEGG: spe:Spro_3938 putative L-xylulose 5-phosphate 3-epimerase; TIGRFAM: hexulose-6-phosphate isomerase; PFAM: Xylose isomerase domain protein TIM barrel

DNA sequence :
ATGCGCCAACACCCATTAGGTATTTATGAAAAAGCCCTGCCGAAACACCTGACCTGGCCAGAGCGCTTAGCACTAGCAAA
GGCCTGTGGTTTTGACTTTGTTGAAATGTCGGTAGACGAAAGCGATGAGCGTCTGGCCCGCCTGCTATGGAGTAAGGAAC
AGCGGCTTTCTCTGGTCAATGCGATGCTGGAAACCGGCATTCGTATCCCTTCGATGTGCTTGTCCGGGCATCGGCGTTTT
CCGTTCGGCAGCCATGATGAAGCACTGCGCCAGCGTGCCTTTACGATCATGGAGCAGGCCATTCAACTGGCCAACGACGT
GGGCATCCGCACCATTCAGCTAGCGGGGTATGACGTCTATTACGAGCAGCAAGATGAAGGCACGCTCGCGCGTTTTACCG
AAGGTATGCAATGGGCGGTTGAACGCGCCGCCGCCGCGCAGGTGATGCTATCCGTGGAGATCATGGACACCGCCTTTATG
AACTCTATCAGTAAATGGAAAGCCTGGGATGCCTGCCTGGCTTCACCGTGGTTTACCGTCTACCCGGACGTCGGCAACCT
CAGCGCCTGGGGCAACAATGTCACGCAAGAATTACAGCTGGGTATCGATCGCATCGCCGCTATCCATCTGAAAGACACCT
TGGCGGTTACCGCAACCTCACCCGGGCAGTTCCGCGACGTACCATTCGGCGAGGGCTGTGTGGATTTTATTTCTGTTTTT
AGCACGTTGAAAACACTCAACTATCGTGGCGCTTTCCTGATTGAAATGTGGACAGAGAAGGCTGATGAACCGGTCGCTGA
GATCGTTCAGGCGCGCCGCTGGATCGAGCAGAAAATGCAACAAGGGGGAATGTCATGCTAA

Protein sequence :
MRQHPLGIYEKALPKHLTWPERLALAKACGFDFVEMSVDESDERLARLLWSKEQRLSLVNAMLETGIRIPSMCLSGHRRF
PFGSHDEALRQRAFTIMEQAIQLANDVGIRTIQLAGYDVYYEQQDEGTLARFTEGMQWAVERAAAAQVMLSVEIMDTAFM
NSISKWKAWDACLASPWFTVYPDVGNLSAWGNNVTQELQLGIDRIAAIHLKDTLAVTATSPGQFRDVPFGEGCVDFISVF
STLKTLNYRGAFLIEMWTEKADEPVAEIVQARRWIEQKMQQGGMSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 2e-69 56