Gene Information

Name : PC1_3652 (PC1_3652)
Accession : YP_003019203.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 4119954 - 4120466 bp
Length : 513 bp
Strand : -
Note : KEGG: eca:ECA3875 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II

DNA sequence :
ATGAATAAAATCTGTTCGAGTGGACTGCGCTGGCTCTGGCTGGCGATACTGGTTTTAGTTATCGATCTTGGCAGCAAGCA
GTGGATCCTTGCCCACTTTGCGCTGGGGGATACGGTGCCAGTGATGCCTTCTCTGAATCTGCATTACGCCCGTAACTACG
GCGCAGCATTCAGCTTCCTGGCGGATAAAGGCGGCTGGCAACGCTGGTTCTTTGCCGGTATCGCGATTGCTATCGTGGTT
GCGCTGCTGGTGATGATGTATCGTGGCAGCGTCAAACACAGGCTGAATAATATTGCGTATTCGCTGATTATCGGTGGCGC
ATTGGGCAATCTGTTTGACCGCACATGGCATGGATTTGTTGTCGACTTCATCGATTTCTATGTCGGTGACTGGCACTTTG
CCACGTTTAACCTGGCCGATACCGCCATCTGTATTGGTGCTGCGCTCATCGTACTGGAAGGGTTTTTCAGTACGCATGAT
GATACTGATACCGTTAAGCAAAAGGGTCACTGA

Protein sequence :
MNKICSSGLRWLWLAILVLVIDLGSKQWILAHFALGDTVPVMPSLNLHYARNYGAAFSFLADKGGWQRWFFAGIAIAIVV
ALLVMMYRGSVKHRLNNIAYSLIIGGALGNLFDRTWHGFVVDFIDFYVGDWHFATFNLADTAICIGAALIVLEGFFSTHD
DTDTVKQKGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 4e-15 47
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 5e-15 47
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 4e-15 45
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 1e-17 44
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 5e-16 42
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 3e-16 42
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 3e-16 42
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 3e-16 42
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 5e-16 42