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Name : PC1_3547 (PC1_3547) Accession : YP_003019099.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : LacI family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG1609 EC number : - Position : 3995736 - 3996926 bp Length : 1191 bp Strand : - Note : PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: eca:ECA3772 LacI family transcriptional regulator DNA sequence : ATGCGTAAGCGTCGCAGTACCGGTAAGGTTACGCTACAGGATGTCGCTGACTACGCGGGCGTAGGAACGATGACGGTATC GCGCGTGATGCGTAAGCCCGATCTGGTTTCTGAGAAGCTACGCAGCAAAGTGGAACTGGCCGCCAGAACATTAGGCTATG AACCTAATCAAGAAGCTAGCCAGCTCACCGAGAGCACGAATCGCGTCACGCTACAGGACATTGCGAGTCACGCCGGTGTT GGTGCGATGACAGTGTCCCGCGCGTTGCGGGAGCCGGGGCTGGTTTCCGATGCCACACAGAAGAAAATCCATGATGCGAT AAAAACGCTGGGCTATGTACCGAACCACGCCGCAGGGGCGTTGGCCTCATCCTATCAACCCGCTATTGCGGTGCTTTATC CTTTTCAGCAAGATCGCGCCAGCGTGCGTTTTGTGCAGGCATTACAGCAGGCGGTGGGCAAACATAATGTGTCGATAATT ATGGGCTGCCATGAATATCGCCAGCACACCGAAGCAGGTATGGTTGAAAAACTCTTGCAGCAGCGGCCAGCGGCGCTGGT GTTATTCAGTGCGCAGCTTTCACAACGAACCCAGGACATCATCCAGGCCAGCAACGTCATTACGGTGAATGTGTCCGGCG CAGCCGCGCTGAATGCGAATATCAACATTGATATTGCCCTTGCCGAAGCGGCGGAACAGCTGACGATGTCACTGCTGGAA AAGGGATATCGCCACGTCGCTTATATTGGTGCGCATACGGATAACCGTTTGCAAAAACAGCAGTTGAACGGCTGGAATAA AGCCATGCTGGCGCATTATCACAATGCGGATTTGAAAATTACGATCCCGGAAGCTCCCAGCCTACAGTTTGGTCGCTATG CCATGACGGAGCTACTGCAAAATCAGCCGGAGCTGGATGCGATTATCTGTAGTCATGAGGAAATTGCGCTAGGCGCGCTC TTTGAATGCCAGCGCCGCCTGATGAAAGTTCCTTACGATCTGGCGATTGCCTGTCTGGATGGTTCTGAACAATGTGAGCA TACGTTCCCGACGCTGACGGCGATGCAGCTTGACTATGAAAAGCTGGGCGCGGAGGTCGGGCGTCTGGTGCTTGCCATGA TGGACAATGACGAACATCCACCGGTAGTGGAAAAAGTGAAGTTTATCTTTGAACCCCGCGCCAGCAGCTAA Protein sequence : MRKRRSTGKVTLQDVADYAGVGTMTVSRVMRKPDLVSEKLRSKVELAARTLGYEPNQEASQLTESTNRVTLQDIASHAGV GAMTVSRALREPGLVSDATQKKIHDAIKTLGYVPNHAAGALASSYQPAIAVLYPFQQDRASVRFVQALQQAVGKHNVSII MGCHEYRQHTEAGMVEKLLQQRPAALVLFSAQLSQRTQDIIQASNVITVNVSGAAALNANINIDIALAEAAEQLTMSLLE KGYRHVAYIGAHTDNRLQKQQLNGWNKAMLAHYHNADLKITIPEAPSLQFGRYAMTELLQNQPELDAIICSHEEIALGAL FECQRRLMKVPYDLAIACLDGSEQCEHTFPTLTAMQLDYEKLGAEVGRLVLAMMDNDEHPPVVEKVKFIFEPRASS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vpeR | ADD91728.1 | putative transcriptional regulatory protein VpeR | Virulence | PAI-I AL862 | Protein | 3e-88 | 54 |
| unnamed | CAC39290.1 | hypothetical protein | Not tested | LPA | Protein | 3e-88 | 53 |
