Gene Information

Name : PC1_3530 (PC1_3530)
Accession : YP_003019082.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3978083 - 3978793 bp
Length : 711 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3756 ABC transporter ATP-binding protein

DNA sequence : 
ATGATTGCCCTACAGGAACTGGCCTTTGGCTATCGTAATCAGCCGCCTCTCGCGACAATCAGCGGATGTTTCCATCAGGG
ATCGCTGACGGCGATTATCGGCGCAAACGGCTGCGGAAAATCGACGCTGCTGAAAACGCTGGCTGGCCTGCTGCCACCGC
TTTCCGGATCATTCCGCCTCGGTGATAGCAGCAAAAACAATGCTATCGGCTATTTGCCACAGCTCTCCGAATTCGATCGA
CAGTTTCCTATCAGCGTACGCGATCTGGTTCTCATGGGGTCACTGCCACATCGCGGCTTGCTGCGGAGTATCAACGCCAA
ATGGTACCGAAAAGCGACCGATGCGCTCGACGCCGTCTCTATGGCGGACTTCGCTGACCGACATATTGGCGTCCTGTCCG
GTGGGCAGCTACAGCGCGTGCTTTTCGCGCGGCTACTGCTGACACAGGCTCCCATCATTCTGTTGGATGAGCCTTTTACT
GGCGTGGATAGCCAAACCACGCAGGCGCTTTTACAAACGATCGAGCAGCTTCACGCCGAAGGCCGAACCATTCTGGCCGT
TTTGCACGATCTGGAACTGGTCGGTCAGCACTTCCCGAACATCCTGCAGCTCACCCCGGACGGCCATCGCTGGGGGGATG
CTCAGCCCATATTACACAGCCTGCGCAAGGCCGACAGCGATACGCCAACGCTCAGGATCATTACGTCATGA

Protein sequence : 
MIALQELAFGYRNQPPLATISGCFHQGSLTAIIGANGCGKSTLLKTLAGLLPPLSGSFRLGDSSKNNAIGYLPQLSEFDR
QFPISVRDLVLMGSLPHRGLLRSINAKWYRKATDALDAVSMADFADRHIGVLSGGQLQRVLFARLLLTQAPIILLDEPFT
GVDSQTTQALLQTIEQLHAEGRTILAVLHDLELVGQHFPNILQLTPDGHRWGDAQPILHSLRKADSDTPTLRIITS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 2e-59 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_3530 YP_003019082.1 ABC transporter-like protein BAC0400 Protein 4e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_3530 YP_003019082.1 ABC transporter-like protein VFG1496 Protein 1e-59 64