Gene Information

Name : PC1_3275 (PC1_3275)
Accession : YP_003018828.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3689986 - 3690246 bp
Length : 261 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory; KEGG: ecf:ECH74115_0316 phage DNA binding protein

DNA sequence :
ATGTTGTCAGCCACACCCTCAACTCCTATTCCTGCTATGCCCCCGATGCCACTTCATCCGGCCAGAGAGCGCTTAATGCG
TCTGCCGGAAGTGCTGCATGTCACCGGCATTTCCCGCTCGACGCTGTATGAACTGAGCGGCCGCAAGGCCTTTCCTGCCC
GTGTTCCGCTGGGTGGGAAGAACGTCGCATGGGTTGAGTCCGAAATTCATCACTGGGTGGCCGAGCGTATCGCCGCCCGC
CAACAGGAGAACCACGCATGA

Protein sequence :
MLSATPSTPIPAMPPMPLHPARERLMRLPEVLHVTGISRSTLYELSGRKAFPARVPLGGKNVAWVESEIHHWVAERIAAR
QQENHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 1e-11 46