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Name : PC1_3254 (PC1_3254) Accession : YP_003018810.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : EvpB family type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3517 EC number : - Position : 3670229 - 3671707 bp Length : 1479 bp Strand : - Note : TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: eca:ECA3444 hypothetical protein DNA sequence : ATGTCAATAGTTGAAGAACAGGCCCAGGCAGGGGCTGCCAGCGCCTCCGGATCGCTGCTTGATGACATCATGGCTCAAGC GCGTATCACCCCGGTCGATGAAGGCTACAGCGTTGCTAAACAGGGGATTGCCGCACTGGTCGCTAACATTCTTGATAGCG GTAATGCAGCAGAACCCGTGAATAAAGCGCTGGTCGATAGCATGATTGTCGAACTGGACAAAAAGCTCAGTAAGCAGATC GACGTTATTCTGCATGCTAAAGAACTTCAGGAGCTGGAATCTTCCTGGCGTTCGCTGAAACTGCTTGTCGATCGCACTGA TTTCCGTGAAAACATCAAACTGTTGGTGTTACATGCGACGAAAGAAGAGCTGTTAGAGGATTTTGAGTTCGCGCCTGAAA TCTCACAGTCTGGCTTCTATAAACATGTGTACTCCAGCGGTTACGGCCAGTTCGGCGGCCAGCCTATTGGTGGCGTGATC GGTGACTATGCGATGACGCAAAGCTCACCAGACATCAAACTGATGCAGTACGTCAGCGCCGTTGGCGCGATGGCGCACGC ACCATTCATCTCTTCCGTTGCGCCGACCTTCTTTGGCGTGGATAGCTTCACCGATTTACCGTCCATCAAAGATCTGAAAT CCGTTTTCGAAGGCCCTGCCTACACGAAATGGCGTTCGCTGCGTGAGTCTGAAGACGGTCGCTATCTGGGGCTGACGGCA CCGCGCTTCCTGGCTCGCTTGCCTTACGACCCGGTAGAAAACCCGATTAAGGGCTTTAACTACAAAGAAGATATCAGCAC CGATCACGAACACTATCTGTGGGGCAATACCGCCTACCTGATGGGAACGGCGCTGACGGACAGCTTCGCGAAATACCGCT GGTGTCCGAACATCATTGGCCCGCAGAGCGGCGGTGCGATTACCGACCTGCCAGTGCATGTTTATGAAGCTATGGGTCAA CTTCAGGCCAAGATCCCGACTGAAGTCCTGATCACCGATCGTCGCGAATATGAAATGGCCGAAGAGGGCTTTATCACGCT GACGATGCGTAAAGACAGCGACAACGCGGCTTTCTTCTCGGCTAACTCGGTGCAGAAGCCGAAGGTGTTCCCGAACACCA AAGAAGGCAAAGAAGCGGAAACCAACTACAAGCTGGGTACGCAGCTGCCGTACATGTTCATCATCAACCGTCTGGCGCAC TACATCAAAGTGCTACAGCGTGAACAGATTGGCTCATGGAAAGAGCGTCAGGATCTGGAACGTGAGCTGAATACCTGGAT TAAACAGTACATCGCCGATCAGGAAAACCCGCCGGCAGATGTCCGTAGCCGTCGTCCTCTGCGTGCTGCACAAATCAAAG TGCTGGATGTGGAAGGAGAACCAGGTTGGTATCAGGTCACCATGTCTGTGCGCCCGCACTTCAAGTACATGGGGGCAAAC TTTGAGCTGTCGCTGGTAGGGCGTTTGGATAAGGAATAA Protein sequence : MSIVEEQAQAGAASASGSLLDDIMAQARITPVDEGYSVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSKQI DVILHAKELQELESSWRSLKLLVDRTDFRENIKLLVLHATKEELLEDFEFAPEISQSGFYKHVYSSGYGQFGGQPIGGVI GDYAMTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFFGVDSFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTA PRFLARLPYDPVENPIKGFNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIGPQSGGAITDLPVHVYEAMGQ LQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFPNTKEGKEAETNYKLGTQLPYMFIINRLAH YIKVLQREQIGSWKERQDLERELNTWIKQYIADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGAN FELSLVGRLDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-171 | 71 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 2e-171 | 71 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 2e-146 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_3254 | YP_003018810.1 | EvpB family type VI secretion protein | VFG2093 | Protein | 0.0 | 78 |
| PC1_3254 | YP_003018810.1 | EvpB family type VI secretion protein | VFG2475 | Protein | 1e-154 | 61 |
