Gene Information

Name : PC1_3247 (PC1_3247)
Accession : YP_003018803.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : type IV / VI secretion system protein, DotU family
Function : -
COG functional category : S : Function unknown
COG ID : COG3455
EC number : -
Position : 3663185 - 3663961 bp
Length : 777 bp
Strand : -
Note : TIGRFAM: type IV / VI secretion system protein, DotU family; KEGG: eca:ECA3437 hypothetical protein

DNA sequence : 
ATGAGCATCGAGGTGATTAAAAACGATCAACTGGGAGATCTGCTGTTTGATCATGCCCGACAGCTGGATATGGACTCCGA
CTACTGGTTTCGCCTGCGCGGGCAAAGCATCAATCCGATGATTGATGCGGTCACGCCGCTATTGGGCATGGTGGAGCGGG
TACGCCAGCTCTCCGCCTACGAGGGCGTAGAGGATCTCTATCAGCGCGTGGTGTCTGAAATTCAGGCTATTGAGCAGGAG
TTACATTCTCATGGCTACGAAAACGGCGTGATTCTGTCGTTCCGCTACATCCTCTGCACCTTCATTGATGAAGCCGTAAT
GGGGCGGGAATGGGGCGGGCAGAGCATGTGGTCGGCCCATTCTCTGCTGACCCGTTTTCACAATGAGACCTGGGGCGGCG
AAAAGGTATTTGTCCTGCTGGAGAAGCTACTGGATGACCCGGCACGCTATCGCGACATTCTGGAGTTTATTTACCTCTGC
CTCTGCCTAGGTTTTGAAGGGCGCTATCGGGTGATGACTCAGGGGCGTGAGGAACTCAATCGCGTCGTGAGCAAGTTGCA
TGACACGCTGCGCCCTGAGCCCGCGGATTCTCCGACCGTCTTCCACCTGAATCTGGGGCAACAGGCCTCGCGCTACCACC
TGCGCAGACAGGTGTCATTGCGCACGCTGTTCATTGGCGTGTGTGTGGTTCTGGTGGCCGCATTCGGCCTGTACCGTTAC
CAGCTAACTCATCAAACCCAGGACGTACTGCGTCAGCTGGGAGAATTATTACAATAA

Protein sequence : 
MSIEVIKNDQLGDLLFDHARQLDMDSDYWFRLRGQSINPMIDAVTPLLGMVERVRQLSAYEGVEDLYQRVVSEIQAIEQE
LHSHGYENGVILSFRYILCTFIDEAVMGREWGGQSMWSAHSLLTRFHNETWGGEKVFVLLEKLLDDPARYRDILEFIYLC
LCLGFEGRYRVMTQGREELNRVVSKLHDTLRPEPADSPTVFHLNLGQQASRYHLRRQVSLRTLFIGVCVVLVAAFGLYRY
QLTHQTQDVLRQLGELLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec26 YP_851419.1 hypothetical protein Not tested PAI II APEC-O1 Protein 7e-58 49
aec26 AAQ96720.1 Aec26 Not tested AGI-1 Protein 6e-58 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_3247 YP_003018803.1 type IV / VI secretion system protein, DotU family VFG2083 Protein 1e-59 47