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Name : PC1_3246 (PC1_3246) Accession : YP_003018802.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3660574 - 3663171 bp Length : 2598 bp Strand : - Note : KEGG: eca:ECA3436 putative chaperone; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase DNA sequence : GTGATTCGAATTGAACTGCCGACACTGGTTGAACGACTCAACCCCGTGTGCCGTCATATGCTGGAAGAAGCGGCGGCACT CTGTATTCAGCATCAGGGTGCGGAAATCCGTATTGAGCACCTGTTGATGAAAATGCTGGAAACGCCCCTGTGTGATGTAC GCCAGATCCTCAAGCGTGCGAGCGTCGATGCGGATGAGCTGTCTTCACTGCTTTTGCCTTCCTCCGTGGATAAGGAATTT GACGCGGGCTACCCTTCATTCTCTCCTCTGCTGGTGGAGTGGTTGCAGGATAGCTGGCTGCTGGCGTCGGCGGAATTTCA ACACACGCGTTTGCGTAGCGGCATTCTGCTGCTGGTCTTGCTGATGACGCCAAATCGCTATGTGGCAGGCGCGATATCTC GTCCGCTGGCGCAGATCAACCGTGAGCTTTTACGCCAGCAGTTTGATGAATGGGTGAAGGATTCGGTTGAAACGGAAGTC GCGGTGCAATCGGCTACAGCCGAACAAGCCGTGGCGGCGACCACGCAGTTGTCCCGCTATACCCAAAACGTAACGGAATC TGCCCGACAGGGACAGTTGGATCCGGTGTTGTGCCGCGACCATGAAATCGATCTGATGATCGACATTCTCTCTCGCCGTC GTAAAAACAACCCGATTGTTGTCGGGGAGGCGGGCGTGGGTAAAAGTGCGCTGATCGAAGGGCTGGCGCTGCGCATCATT GCGGGCGCGGTGCCGGAAAGATTGCGGGATGTCGAACTGCTTACGCTCGATCTGGGAGCGATGCAGGCTGGCGCCTCGGT GAAAGGTGAATTTGAGAAACGCTTCAAAGGTGTGATGCAGGAAGTGAAAGAGGCGCCGCGCCCTATCATTCTGTTTATCG ATGAAGCGCATACGCTCATCGGGGCCGGTAATCAGGCGGGCGGGCTGGATGTTTCCAACCTGCTCAAGCCAGCGCTGGCG CGCGGTGAACTGCGTACGATCGCGGCAACGACCTGGAGCGAATACAAAAAATACGTGGAGAAGGACGCCGCGCTTTCCCG TCGTTTCCAACTCGTCAAAGTGGGTGAGCCGAACGCGGAAGAAGCCACGGTTATCTTACGCGGGCTGCGCGGCATCTATG AAAAGGCGCACGGCGTCCTGATTGATGAAGATGCGCTTCAGGCGGCGGCACAGCTGTCGGCGCGTTATATCTCCGGCCGT CAACTGCCGGATAAGGCGATTGACGTGCTGGATACCGCCAGCGCGCGCGTCGCCATTAACCTGACGACGCCACCGCGTGC GGTCAGCCAGCTCCAGACTCGCCTGCGCCAGCAGGAGATGGAAATCACCCAGCTTGAGCGTCAGGCGCGTATCGGCTTGG GCAATACCGAAGAGCGGTTAGCGGAACTGCGTGACGCCCGTGAGGCCGGCGCGGCACAGCTGGCGCAGTTGGAAGCCGAT TGGCAGCAGCAGAAAACGCAGGTTCAGCGCGTGATTGAACTGCGTACCGCGCTGCTGGATGACGAGCAGGCTGTCGATTT TGATGCAGCATCGGCGACGGCGGAGCTGGCCGCCTGTGAACAGGCGCTGGAAGCACTGCAACACTCCTCCGTTCTGGTCT CCCCTCACGTTGATAAAACGCAGATTGCGGCGGTTATTGCCGAGTGGACGGGCGTGCCGCTGAATCGCATCTCACAGGGT GAAATGGATGTCGTCACGCGCCTGCCTGAATTCCTGGGCGAGTCGATTAAAGGGCAGCAGTTGGCGATTGCCCACCTGCA TAAACACCTACTGACCGCGCGCGCCGATCTACGTCGTCCGGGGCGTCCGCTGGGGGCTTTCCTGCTGGTGGGGCCGAGCG GTGTGGGTAAAACGGAAACCGTGGTGCAGATCGCCGACCTGATGTTTGGCGGACGTAACTATCTGACCACTATCAATATG TCCGAGTATCAGGAGAAACACACGGTTTCACGTCTGATCGGGTCACCGCCGGGCTATGTCGGGTTTGGTGAAGGAGGCGT CTTGACCGAAGCTATCCGCCAGAAACCGTATTCCGTGGTACTGCTGGATGAAGTGGAAAAGGCGCATCCCGATGTCCTGA ACCTGTTCTATCAGGCGTTTGATAAAGGTGAACTCGCCGATGGCGAAGGCCGAGTGATCGACTGTCGCAACGTGGTGTTC TTCCTGACGTCCAACCTCGGGTTCCAAACGATCGTGAATTACGCTGAGCAGTCGGATGTGTTGCTGGACGCGCTCTATCC CGAACTGGCGGCCTTCTTTAAACCTGCGCTGTTGGCGCGCATGGAAGTCATTCCGTACCTGCCGCTGGCGCATGACACCA TGGTCGAAATTGTACAGGGCAAACTGTCGCGTCTGGTGTCTCTGCTGCAACAGCGCTTTGGCGCGGAAGTCATTATTGAA GACGAGGTGCCGGAAGAGATTCTGCGGTTGGCGAACCGCAGCGAAAATGGGGCGCGTATGCTCGAATCGGTGATTGATGG TGCCTTGCTGCCGCCGGTTTCGCTACAGCTGCTGCAACGCCTGTCTGCGGGCGAACCCGTCAGCCGCATTCATTTCCGCG TCGACGCCGGCCAGTTCCAGACTGAGGTGGAGGGCTGA Protein sequence : MIRIELPTLVERLNPVCRHMLEEAAALCIQHQGAEIRIEHLLMKMLETPLCDVRQILKRASVDADELSSLLLPSSVDKEF DAGYPSFSPLLVEWLQDSWLLASAEFQHTRLRSGILLLVLLMTPNRYVAGAISRPLAQINRELLRQQFDEWVKDSVETEV AVQSATAEQAVAATTQLSRYTQNVTESARQGQLDPVLCRDHEIDLMIDILSRRRKNNPIVVGEAGVGKSALIEGLALRII AGAVPERLRDVELLTLDLGAMQAGASVKGEFEKRFKGVMQEVKEAPRPIILFIDEAHTLIGAGNQAGGLDVSNLLKPALA RGELRTIAATTWSEYKKYVEKDAALSRRFQLVKVGEPNAEEATVILRGLRGIYEKAHGVLIDEDALQAAAQLSARYISGR QLPDKAIDVLDTASARVAINLTTPPRAVSQLQTRLRQQEMEITQLERQARIGLGNTEERLAELRDAREAGAAQLAQLEAD WQQQKTQVQRVIELRTALLDDEQAVDFDAASATAELAACEQALEALQHSSVLVSPHVDKTQIAAVIAEWTGVPLNRISQG EMDVVTRLPEFLGESIKGQQLAIAHLHKHLLTARADLRRPGRPLGAFLLVGPSGVGKTETVVQIADLMFGGRNYLTTINM SEYQEKHTVSRLIGSPPGYVGFGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRVIDCRNVVF FLTSNLGFQTIVNYAEQSDVLLDALYPELAAFFKPALLARMEVIPYLPLAHDTMVEIVQGKLSRLVSLLQQRFGAEVIIE DEVPEEILRLANRSENGARMLESVIDGALLPPVSLQLLQRLSAGEPVSRIHFRVDAGQFQTEVEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-125 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_3246 | YP_003018802.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 0.0 | 61 |
