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Name : PC1_3239 (PC1_3239) Accession : YP_003018795.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : Hcp1 family type VI secretion system effector Function : - COG functional category : S : Function unknown COG ID : COG3157 EC number : - Position : 3649589 - 3650107 bp Length : 519 bp Strand : - Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA2866 hypothetical protein DNA sequence : ATGCCAACTCCATGCTATATCAGCATCGAAGGTAAAACGCAGGGCAACATCACCGCGGGTGCTTTCACGTCTGATTCTGT CGGCAACATCTATGTGGAAGGCCACGAAGACGAAATGCTGGTACAGGAATTCAAACACATAGTCACCGTACCAACCGACC CGCAGTCTGGTCAGCCATCCGGCCAGCGCGTACACAAGCCGTTCAAATTCACCGTTGCGCTGAACAAAGCGGTTCCGCTG ATGTACAACGCCCTGGCGTCCGGTGAAATGCTGCCGACCGTCACCCTGAAATGGTACCGCACGTCAGTTGAAGGTAAGCA GGAGCACTTCTTCTCTACCGTGCTGACCGATTCCACCATCGTTGACATCGACTGCAAAATGCCACATTGCCAGGATCCGT CAAAACTGGACTACACCCAGTTAATCGAAGTGTCGCTGGCCTATCGCAAAATTGACTGGGAGCACACGGTTGCCGGTACT TCTGGTTCCGATGACTGGCGTGCGCCGGTCGAAGCGTAA Protein sequence : MPTPCYISIEGKTQGNITAGAFTSDSVGNIYVEGHEDEMLVQEFKHIVTVPTDPQSGQPSGQRVHKPFKFTVALNKAVPL MYNALASGEMLPTVTLKWYRTSVEGKQEHFFSTVLTDSTIVDIDCKMPHCQDPSKLDYTQLIEVSLAYRKIDWEHTVAGT SGSDDWRAPVEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec16 | YP_851428.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 9e-65 | 80 |
| aec16 | AAQ96710.1 | Aec16 | Not tested | AGI-1 | Protein | 6e-65 | 80 |
| HH0243 | NP_859774.1 | hypothetical protein | Not tested | HHGI1 | Protein | 9e-48 | 63 |
