Gene Information

Name : PC1_3193 (PC1_3193)
Accession : YP_003018752.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : phage major tail tube protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3498
EC number : -
Position : 3602725 - 3603246 bp
Length : 522 bp
Strand : +
Note : TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: see:SNSL254_A4384 phage major tail tube protein

DNA sequence :
ATGGCACTGCCTCGCAAACTGAAAATGATGAACCTGTTCAATGACGGCATGAGCTACATGGGCGTAGCGACTGCCGTCAC
ACTGCCGAAACTCACGCGCAAGCTGGAGAACTATCGCGGCGGCGGCATGAACGGCAGCGCCCCCATCGATTTTGGGCTGG
ATGATGACGCGCTGTCGATGGAATGGACAATGGGTGGCTTTGCAGACGAAACCCTGTGGAGCCAGTACGCCGCACCGGGC
ATTGATGCGGTACTGCTGCGTTTTAATGGGTCGTATCAACGCGACGACACCGGGGAAATTTCTGCCGTTGAAGTGGTGAT
GCGCGGCCGTCATAAGGAGATCGACGGCGGCGAAAGCAAAGAAGGTGAAGATACCGAAACCAAGATTTCGACCCAATGCA
CGTACTACAAGCTAACCATCGACGGCAAAGAGATGATCGAGATTGACACCCTCAACATGATTGAGCGTGTGGTGGGCGTT
GACCGTCTGGAGCAACACCGCCGGGCGATTGGTCTGGCGTAA

Protein sequence :
MALPRKLKMMNLFNDGMSYMGVATAVTLPKLTRKLENYRGGGMNGSAPIDFGLDDDALSMEWTMGGFADETLWSQYAAPG
IDAVLLRFNGSYQRDDTGEISAVEVVMRGRHKEIDGGESKEGEDTETKISTQCTYYKLTIDGKEMIEIDTLNMIERVVGV
DRLEQHRRAIGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13485.1 phage tail tube protein Not tested PAGI-6 Protein 2e-46 57
STY4606 NP_458689.1 probable major tail tube protein Not tested SPI-7 Protein 1e-39 56
t4300 NP_807897.1 major tail tube protein Not tested SPI-7 Protein 1e-39 56