Gene Information

Name : PC1_3189 (PC1_3189)
Accession : YP_003018748.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : Baseplate J family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 3597650 - 3598558 bp
Length : 909 bp
Strand : +
Note : PFAM: Baseplate J family protein; KEGG: ecv:APECO1_4480 putative baseplate assembly protein

DNA sequence :
ATGGCGATGATTGATTTAAGCCAGCTTCCCGCGCCTGCCGTGGTGGAAGAACTGGATTACGAGGCAATTTACACCGAGCG
CAAAGCCATGCTGCTGTCGCTCTATCCGGAAGACCAGCGTGCTGCCGTTGCACGCACGCTGACGCTGGAATCCGATCCAC
TCGTCAAGCTGTTACAGGAAAACGCCTACCGCGAATTGTTATGGCGTCAGCGCGTCAATGAAGCGGCACGCGCCGTGATG
GTGGCGTTTGCGCAGGGTGATGACCTCGACCAGCTCGGCGCAAATTTCAGCGTTTCTCGTCTGGTGATTACCCCGGCTGA
CGATTCAACCCTGCCGCCCACGCCTGCCCTGATGGAGTCAGACAGTGATTTTCGTCTGCGCATTCAACAGTCGTTTGAGG
GTTTGAGCGTGGCCGGGTCGGTCGGTGCCTATCAGTACCACGGACGCAGCGCCGACGGGCGTGTGGCGGATGTGTCGGTT
GTCAGCCCCAGCCCGGCCAGCGTTACCGTGTCGGTACTGTCACGCGAGGGCGACGGCAACGCCAGCCCGGAGCTGGTCGC
CATCGTGGCCGCCGCCCTGAACGGCGAAGACGTGCGCCCGGTGGCTGATCGGGTCACGGTACAGTCTGCTGTGATTGTTC
CGTATGAGATTGACGCCACGCTGTATCTGTATTCGGGACCGGAAAAAGAGCCTGTTCGCGCGGCGGCCGAGCAGAAGCTG
AAAACCTATATCAGTGCGCAGCACCGATTAGGGCGGGATATTCGCCGCTCGGCGATTTACGCTGCGCTGCACGTCGAGGG
CGTGCAACGGGTCGAGCTGACGACACCCGCCGACGATATCGTGCTGACTGACGCGCAGGCGTCCTACTGTTCCGGCTATC
GGCTGGGTGTGGGCGGTGCCGATGAGTGA

Protein sequence :
MAMIDLSQLPAPAVVEELDYEAIYTERKAMLLSLYPEDQRAAVARTLTLESDPLVKLLQENAYRELLWRQRVNEAARAVM
VAFAQGDDLDQLGANFSVSRLVITPADDSTLPPTPALMESDSDFRLRIQQSFEGLSVAGSVGAYQYHGRSADGRVADVSV
VSPSPASVTVSVLSREGDGNASPELVAIVAAALNGEDVRPVADRVTVQSAVIVPYEIDATLYLYSGPEKEPVRAAAEQKL
KTYISAQHRLGRDIRRSAIYAALHVEGVQRVELTTPADDIVLTDAQASYCSGYRLGVGGADE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 1e-82 60
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 1e-82 60
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 1e-66 58