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Name : PC1_3178 (PC1_3178) Accession : YP_003018737.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : glycoside hydrolase family protein Function : - COG functional category : R : General function prediction only COG ID : COG3772 EC number : - Position : 3592228 - 3592737 bp Length : 510 bp Strand : + Note : PFAM: glycoside hydrolase family 24; KEGG: see:SNSL254_A4372 glycoside hydrolase, family 24 DNA sequence : ATGAAATCACTCGTTAAACGCTGCGTTATCGCAACGGTGTTAGCGCTGGCCGCGTTAGTGCCAGATTTTTCCTTGCTGAA AACGTCACAGGAGGGGCTGGCGCTGATTGCTGACCTTGAGGGGTGCCGCTTAAGTCCCTATCAGTGCAGCGCGAACTTGT GGACAAACGGGATCGGACACACCGCAGGCGTGGTGCCGGGGAAAACCATCACCGAGCGTGAGGCAGCGGTCAATCTTGTG GCCGATGTGTTACGGGTAGAAAAGGCACTGGCGCGTTGTATGGCCGTGAACATGCCGCAGGCCGTCTATGATGCCATTGT GAGCTTTGCGTTTAATGTCGGTGTCGGTGCGGCGTGTCGCTCTACGCTGGCGTTTTTCATCAACAAAGGCCAGTGGCGCA ACGCCTGTGACCAGTTGCTGCGCTGGGTGTATGTCAACGGCGAGGTATCACGCGGTATTGAAACCCGTCGCCAGCGTGAG CGCGCCGTCTGTCTTAAGGGGGCAGCATGA Protein sequence : MKSLVKRCVIATVLALAALVPDFSLLKTSQEGLALIADLEGCRLSPYQCSANLWTNGIGHTAGVVPGKTITEREAAVNLV ADVLRVEKALARCMAVNMPQAVYDAIVSFAFNVGVGAACRSTLAFFINKGQWRNACDQLLRWVYVNGEVSRGIETRRQRE RAVCLKGAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nucD2 | NP_458702.1 | putative lysozyme | Not tested | SPI-7 | Protein | 1e-43 | 64 |
| nucD | NP_807909.1 | lysozyme | Not tested | SPI-7 | Protein | 1e-43 | 64 |
