Gene Information

Name : PC1_3162 (PC1_3162)
Accession : YP_003018721.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : TraR/DksA family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 3579934 - 3580158 bp
Length : 225 bp
Strand : +
Note : TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: ecz:ECS88_2222 hypothetical protein

DNA sequence :
ATGCCGGATGCTATGGACATGGTGCAGCAGCGCCAACAGGAAATGTTAGACCATCAGATCGCCAGCGCCCGGAACAGATT
ACCCGTTGTATCTGCGTGTATCTGTGAAGAGTGTGATAGCCCCATTCCCGAAGCGCGCCGGGCTGCAATCGAAGGCGTGA
CTCGTTGCGCGTCCTGTCAGGATATTCTCGAAAAGAAACGTAAGCATTATCGGGGTGGGTTATGA

Protein sequence :
MPDAMDMVQQRQQEMLDHQIASARNRLPVVSACICEECDSPIPEARRAAIEGVTRCASCQDILEKKRKHYRGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4638 NP_458718.1 hypothetical protein Not tested SPI-7 Protein 4e-13 55
t4331 NP_807925.1 hypothetical protein Not tested SPI-7 Protein 4e-13 55