Gene Information

Name : PC1_3152 (PC1_3152)
Accession : YP_003018711.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3573374 - 3574432 bp
Length : 1059 bp
Strand : -
Note : PFAM: integrase family protein; KEGG: stm:STM2739 phage tail-like protein

DNA sequence :
ATGTCAGTAAGAAAATTACCTAACGGGAAATGGCTGTGTGAGTGCTATCCAAATGGGCGAGACTCTCGGCGCATAAGAAA
GACGTTTAACACAAAAGGTGAAGCTGAATCTTTTGAAACCTACACCATGCGTGAGGTTGAAGACAAACCGTGGCTGGGTG
AGAAAGAGGATCGCCGTAACCTGAGTGAACTTATTGAGCTTTGGAATAATTTACATGGGCAGGCACTCAGCGCCAGCAAA
TCACGGATGGGTAAACTGCGTATCATCTGTAACGGGTTGGGTGACCCGGTGGCTTCTAAGCTGACAGCGAAAGACTGGGC
GCATTATCGAGATAAGCGCCTACGTGGAGAAATTGATAACGGCTACCATTCTGACCCCAAAATGTGGATAGCGAAGCCGA
TCACAGTGAACCGAGAACACCAATACCTTTATGCCATGTTCAATGAACTGAAAAGGCTAGGGGAGTGGACGTTACCTAAC
CCGTTAGAAGGAATGCGCATCTTTAAAGAAGCTGATCGCGAAATGTCGTGGCTGACGACCTCCCAAATCCAACAATTGCT
GGATGCCTGTGAACGCTACGGAAAAATTTACCTTACGCGGATTGTTAAAGTGTGTCTGGCGACAGGGGCAAGATGGAGTG
AAGCAGAAGGGCTAACCCGTTCTCAGCTATCCCCTTACAAGTTGACGTTCTTCAAAACCAAAGGCAAGAAAAACCGGACG
GTGCCGATCCCGCGTTGGCTTCATGATGAGTTATCAGAATTACAAGGGAAGATGTTCCAGCCGTGCTATCAGGATTTTGT
AAAGATGCTGGCCTTAACAAACATCGAGCTTATTGAAGGGCAAAACACCCACGTTTTACGGCACACTTTTGCGTCACATT
TTATGATGAACGGCGGGAACATTTTGGTGCTCCAGCGCATTCTGGGGCATGCCAATATTCGCGAAACGATGCGGTATGCA
CACTTTGCCCCTGACCATCTGGAAGAAGCCGCCCACCTTAACCCCTTAGCTGGTTACAATGGCGGCAAAGTGGCGGCAGA
GAATAATAAAGGCTACTAA

Protein sequence :
MSVRKLPNGKWLCECYPNGRDSRRIRKTFNTKGEAESFETYTMREVEDKPWLGEKEDRRNLSELIELWNNLHGQALSASK
SRMGKLRIICNGLGDPVASKLTAKDWAHYRDKRLRGEIDNGYHSDPKMWIAKPITVNREHQYLYAMFNELKRLGEWTLPN
PLEGMRIFKEADREMSWLTTSQIQQLLDACERYGKIYLTRIVKVCLATGARWSEAEGLTRSQLSPYKLTFFKTKGKKNRT
VPIPRWLHDELSELQGKMFQPCYQDFVKMLALTNIELIEGQNTHVLRHTFASHFMMNGGNILVLQRILGHANIRETMRYA
HFAPDHLEEAAHLNPLAGYNGGKVAAENNKGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 6e-96 61
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 6e-96 61