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Name : PC1_3141 (PC1_3141) Accession : YP_003018700.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3560680 - 3563253 bp Length : 2574 bp Strand : - Note : KEGG: eca:ECA3345 protein disaggregation chaperone; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: A DNA sequence : ATGCGTCTGGATCGTCTTACCAACAAATTCCAACTTGCTCTTGCTGATGCTCAGTCTCTCGCCCTTGGGCGTGACCACCA GTTTATTGAACCCCTTCACTTGATGAGCGCTTTGCTTCATCAGGATGGTGGAACTGTTGGCCCACTTCTGACTGTTGCCG GAGCCAATCTTAATCACCTGAAAACCGAAATCGATCAGGCAATCAAGCGTTTGCCTCAGGTTGAAGGTACCGATGGTGAT GTCCAACCTTCAAGCGAGTTAGTCCGCGTATTAAATATGTGCGACAAGCTGGCGCAAAAGCGTAACGATACCTTTATCTC TTCGGAACTTTTCGTGCTCGCTGCGCTGGAGTCTCGCGGCACGTTGGGAGATATATTGAAAAAGGCGGGTGTTACGCAGC AAGGGGTAACAAACGCGATTGATCAAGTGCGAGGAGGGGAGCAAGTGAACGACCAAGGGGCTGAGGATCAGCGCCAGGCA TTGAAGAAATTCACAATTGATCTCACGGAACGTGCGGAACAAGGCAAGCTCGATCCTGTGATCGGGCGTGATGAAGAGAT TCGCCGCACTATTCAGGTTTTACAGCGTCGAACCAAAAATAACCCGGTATTAATTGGTGAACCCGGTGTGGGTAAAACCG CAATAGTTGAAGGGTTAGCCCAGCGTATCGTTAATGGTGAAGTGCCTGAAGGCTTGAAAAACAAGCGAGTCCTTTCACTG GATATGGGCGCGCTGGTAGCTGGCGCGAAATATCGTGGTGAGTTTGAAGAGCGTTTGAAAGGCGTGCTCAACGATTTGTC TAAGCAGGAAGGCAACGTCATTCTGTTTATTGATGAACTCCACACGATGGTGGGCGCGGGCAAAGCCGATGGCGCGATGG ATGCAGGTAATATGCTAAAACCTGCGTTGGCGCGTGGTGAGTTGCACTGCGTCGGGGCGACAACGCTGGATGAGTATCGG CAGTATATTGAAAAAGATGCAGCGCTTGAGCGCCGTTTTCAGAAGGTGTTTGTCGCAGAACCTACCGTTGAGGACACCAT TGCGATTCTGCGTGGGCTGAAAGAGCGCTATGAATTGCATCATCACGTACAAATTACTGACCCGGCGATTGTGGCGGCGG CCATGCTCTCCCATCGCTATATCGCGGATCGTCAGTTGCCGGATAAGGCGATTGACCTGATTGATGAAGCGGCGTCTAGC ATTCGTATTCAGATTGATTCAAAACCAGAGCCTCTCGATCGGCTTGAGCGCCGGATCATTCAGTTAAAGCTGGAGCAACA GGCGCTGAAAAAAGAATCTGATGAAGCCAGCCAAAAACGGCTTGAATTGCTGAGTGCGGAACTTGACCAGAAAGAGCGTG AATATTCCCAGCAAGAAGAAGAGTGGAAAGCAGAAAAAGCATCACTCACGGGAACACAGAATATTAAGGCGTCCTTAGAG CAGGCGAAAATTGCGCTGGAACAGGCTCGCCGTCAGGGCGATTTGGGGAGAATGTCTGAACTGCAATACGGCAAAATCCC CGAACTAGAGAAACAACTGGCAGCAGCAACGCAGCAAGAAGGAAAAACGATGCATTTGCTGCGTAATAGAGTAACAGATG TTGAAATTGCTGATGTGCTGGCGCGTTGGACTGGTATTCCTGTTTCTCGCATGCTGGAAAGCGAGAAAGAAAAATTATTG CGCATGGAAGATGAGCTGCATCAGCGTGTGATTGGGCAGAACGAAGCCGTCGAAGCGGTAGCGAACTCTATCCGTCGCAG CCGGGCAGGGCTATCTGACCCTAATCGTCCAATTGGATCGTTCCTGTTCCTTGGTCCAACTGGCGTTGGTAAAACCGAAC TTTGTAAAACGCTGGCGACTTTCCTCTTCGACAGTGACGACGCCATGGTGCGTATCGATATGTCTGAGTTTATGGAGAAA CACTCGGTTTCACGTTTGGTCGGGGCGCCTCCTGGATATGTCGGTTACGAAGAAGGGGGATATCTGACGGAAGCGGTACG CCGTCGTCCTTATTCGGTCATTTTGCTGGATGAGATCGAAAAAGCCCACCCTGATGTGTTCAACATCTTGCTTCAGGTAT TGGATGATGGTCGTCTTACTGATGGTCAGGGCAGAACGGTCGACTTCCGTAATACTGTGGTCATCATGACATCAAACTTG GGGTCTGACCTTATTCAGGAACGTTTTGGTGAGCGCAGTTATACCGAAATGAGAGATATGGTTCTTGAAGTTGTTAGCCA CAACTTCCGTCCTGAATTTATTAACCGTATCGATGAGGTCGTGGTATTCCATCCACTGGGAAGAGCGCACATTACGTCGA TCGCAAAAATTCAGCTTCAGAGACTATACAAACGTCTTGAAGAGCGTGGATATAGCGTCACGATTACGGATGCGGCTTTA GATATGCTCGGAGAGGTCGGGTTTGATCCTGTCTATGGTGCGCGTCCGCTTAAAAGAGCGATACAGCAACTGATAGAGAA CCCACTTGCTCAGCAGATACTTGGGGGAAAATTGATCCCCGGTAAACCGATCACATTAGATGTTGAAGGTGAACAGATAG TCGCACGGCAATAA Protein sequence : MRLDRLTNKFQLALADAQSLALGRDHQFIEPLHLMSALLHQDGGTVGPLLTVAGANLNHLKTEIDQAIKRLPQVEGTDGD VQPSSELVRVLNMCDKLAQKRNDTFISSELFVLAALESRGTLGDILKKAGVTQQGVTNAIDQVRGGEQVNDQGAEDQRQA LKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL DMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYIADRQLPDKAIDLIDEAASS IRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSAELDQKEREYSQQEEEWKAEKASLTGTQNIKASLE QAKIALEQARRQGDLGRMSELQYGKIPELEKQLAAATQQEGKTMHLLRNRVTDVEIADVLARWTGIPVSRMLESEKEKLL RMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDAMVRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGERSYTEMRDMVLEVVSHNFRPEFINRIDEVVVFHPLGRAHITSIAKIQLQRLYKRLEERGYSVTITDAAL DMLGEVGFDPVYGARPLKRAIQQLIENPLAQQILGGKLIPGKPITLDVEGEQIVARQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-158 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_3141 | YP_003018700.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 2e-110 | 42 |
| PC1_3141 | YP_003018700.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 1e-104 | 41 |
