Gene Information

Name : PC1_3133 (PC1_3133)
Accession : YP_003018692.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 3546101 - 3548266 bp
Length : 2166 bp
Strand : +
Note : KEGG: eca:ECA3337 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase domain protein; Ribonucleotide reductase large subun

DNA sequence :
TTGGCAACAACAGACCACGTGAGTGCAAAGGCAACCAAGGCCGACTCAGATGCCCACTCACTCGATTACCACGCGCTGAA
CGCGATGCTTAACCTCTACGACGCAGAGGGGAATATCCAGTTCGAGATGGATAAGCTCGCGGCGCGCCGTTATTTCCTAC
AGCATGTAAACCAGAACACCGTGTTCTTCCACAATTTGGAAGAAAAGCTGCGTTATCTGGTGGAAGAAGGCTACTACGAA
GCGGAAGTACTGGATCAATATCAGTTCGATTTCATCAAGCGTCTTTTCCAGCAGGCTTACGCTCACAAGTTCCGCTTTCA
AACCTTTCTAGGTGCGTTCAAATACTACACCGGCTATACGCTAAAAACCTTTGACGGCAAGCGCTATCTGGAGCGCTACG
AAGATCGCGTCTGCCTTGTGGCGCTAACCCTCGCCAAAGGGGACACCGCACTGGCTGGCGCGCTGGTCGATGAGATCATC
AGCGGGCGCTTCCAGCCCGCCACCCCCACGTTCCTCAACTGCGGTAAAAAGCAGCGCGGCGAGCTGGTCTCCTGCTTCCT
GCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGAGCCATTAACTCCGCGCTTCAGCTCTCAAAACGCGGCGGCGGCG
TGGCATTCATGCTCAGCAACATCCGCGAAACCGGTGCGCCAATCAAACGTATCGAAAACCAGTCATCTGGCATTATTCCG
ATCATGAAAATGCTCGAAGACGCGTTCTCCTACGCCAACCAGCTTGGTGCTCGTCAGGGGGCTGGCGCAGTGTACCTCAA
TGCGCATCACCCGGATATTCTGCGTTTTCTGGATACCAAGCGGGAAAATGCCGATGAGAAAATTCGTATCAAAACACTGT
CTTTGGGTGTGGTCATTCCCGATATCACGTTCCAGTTGGCGAAGAATAATCAGGTGATGTACCTGTTCTCGCCTTATGAC
GTCGAGCAGGTTTATAGCGTACCGCTATCAGAAATTAGCGTCACCGAAAAATACCACGAGATGGTAAACGATAAGCGCAT
CCGTAAATCCCAAATCAAGGCGCGCGAATTCTTCCAGATCCTCGCCGAAATCCAGTTTGAGTCCGGTTATCCCTACATGA
TGTTTGAGGATACGGTGAATCGCGCAAATCCGATTCACGGCCGCATCAATATGAGCAACCTGTGCTCTGAGATTTTGCAG
GTCAACGACGCCAGCCTGTACGATGACGATCTCGGCTATCGCCACATTGGCAAGGACATCTCCTGTAACCTCGGTTCGAT
GAATATTGCCAACGCGATGGCTTCGCCCGATTTCGGCCAGACGGTTGAAATGGCGATCCGCGCACTGACCGCCGTTTCCG
ATATGAGCCATATCCGCTCCGTGCCATCCATCGAAAAAGGCAACGACGAATCCCATGCGATTGGTTTAGGTCAGATGAAC
CTGCACGGCTATCTGGCGAAAGAGCGTATTTTTTACGGCACAGAAGAAGCCGTCGATTTCACCAATATCTATTTCTATAC
CGTCGCTTTCCACGCGATTCGGGCATCGAATGCGTTAGCCATAGAACGGAACCAGCGCTTCTCAGGCTTCGAGCACTCCA
AATACGCCACAGGCGAGTATTTTGATAAATACATTGAACAGTGCTGGGAGCCCACAACCGCGCGCGCCCGTGAACTGTTT
GAACAAGCCGATATCCACATTCCTACTCAGCAGGACTGGGCGGCGTTACGCGAATCTGTTATTGCTCACGGCATTTATAA
CCAGAACTTGCAGGCTGTTCCACCGACCGGTTCGATTTCGTATATCAACCACTCGACGTCCAGTATCCACCCGATTGTGT
CACGCATCGAAATTCGTAAAGAGGGCAAGATCGGCCGCGTCTACTACCCCGCTCCTTACATGAACAATGACAATCTCGAG
TATTACCAGGATGCCTATGAGATTGGGCCGCAGAAGATCATCGACACCTATGCCGCCGCTACGCAGCACGTCGATCAGGG
GCTGTCGCTGACGCTGTTTTTCCGTGATACCGCCACCACGCGAGACATCAATAAAGCGCAGATCTACGCCTGGACAAAAG
GTATTAAGACTATTTATTACATTCGCATACGGCAAATGGCGCTGGAAGGCACCGAAGTTCAGGGCTGTGTGTCCTGTGCG
CTATAA

Protein sequence :
MATTDHVSAKATKADSDAHSLDYHALNAMLNLYDAEGNIQFEMDKLAARRYFLQHVNQNTVFFHNLEEKLRYLVEEGYYE
AEVLDQYQFDFIKRLFQQAYAHKFRFQTFLGAFKYYTGYTLKTFDGKRYLERYEDRVCLVALTLAKGDTALAGALVDEII
SGRFQPATPTFLNCGKKQRGELVSCFLLRIEDNMESIGRAINSALQLSKRGGGVAFMLSNIRETGAPIKRIENQSSGIIP
IMKMLEDAFSYANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKNNQVMYLFSPYD
VEQVYSVPLSEISVTEKYHEMVNDKRIRKSQIKAREFFQILAEIQFESGYPYMMFEDTVNRANPIHGRINMSNLCSEILQ
VNDASLYDDDLGYRHIGKDISCNLGSMNIANAMASPDFGQTVEMAIRALTAVSDMSHIRSVPSIEKGNDESHAIGLGQMN
LHGYLAKERIFYGTEEAVDFTNIYFYTVAFHAIRASNALAIERNQRFSGFEHSKYATGEYFDKYIEQCWEPTTARARELF
EQADIHIPTQQDWAALRESVIAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSRIEIRKEGKIGRVYYPAPYMNNDNLE
YYQDAYEIGPQKIIDTYAAATQHVDQGLSLTLFFRDTATTRDINKAQIYAWTKGIKTIYYIRIRQMALEGTEVQGCVSCA
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 74