|
Name : PC1_2929 (PC1_2929) Accession : YP_003018488.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 3303278 - 3304444 bp Length : 1167 bp Strand : - Note : KEGG: eca:ECA3147 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase DNA sequence : ATGAAAATAGCGATTAGCGGAACAGGATATGTCGGTTTATCGAATGGATTATTATTGGCACAACAGCATCAGGTTGTGGC GTTAGATATTGTGGCTGAAAAAGTGGCGATGTTGAATCAACGCAAATCGCCGATTAATGACGCCGAGATTGAGCGTTTTT TACAACACGAAACGCTGAATTTTTCCGCTACGCTGGATAAGCATGAAGCGTATGCCGATGCGCAGTTCGTGATTATCGCT ACGCCGACAGATTACGATCCACACACTAACTATTTCAACACGTCGTCGGTAGAGGCGGTCATTCGCGATGTGCTGGCGAT TAACCCACAGGCCATTATGGTGATTAAATCGACGGTGCCTGTTGGTTTCACCGAGAAAATCAGCCAGCAGTTGGATACCG ATAACATCATTTTTTCGCCCGAGTTTTTGCGCGAAGGAAAGGCGCTGTACGACAACCTTTACCCATCGCGGATTGTCGTG GGTGAGCGGTCGGAAAGAGCCCGTTTTTTCGCTAACCTATTGATGGAATGTGCATTAAAAAAAGATATTCGCGTACTGTT TACCGACCCGACAGAGGCCGAGGCGATAAAACTGTTTGCGAATACCTTCCTGGCGATGCGTGTCGCCTACTTTAATGAAT TGGACAGCTATGCTGAATCGCTGGGGTTGAATACCCGGCAGATTATTGAAGGTGTGTGCCTCGATCCGCGTATTGGCAAC TACTACAACAATCCTTCTTTCGGCTACGGCGGCTACTGTTTGCCGAAGGATACCCGGCAGCTTTTGGCTAACTATCGTAC TGTTCCGAATAACCTTATCAAGGCTATCGTGGACGCTAACCATACGCGGAAAGACTTCATTGCCGATACGATTATCCGGC GCCATCCGAAAACCGTCGGCGTTCATCGCCTCATCATGAAAGCGGGGTCGGATAATTTTCGCTTTTCTTCCATTCAGGGC ATTATGAAAAGGATAAAAGCGAAAGGAATCAATGTCGTGGTTTATGAACCTGGGATTGATGATGATGATTTCCTGGATTT CCCCGTCATTCACCAACTCGATAGTTTTAAACAACAGTGTGACATTATTATTACCAACCGCTATGCCGACGAATTAAAAG ATGTAATAGGGAAGGTTTATACAAGAGACTTATTTGGTGAGGATTGA Protein sequence : MKIAISGTGYVGLSNGLLLAQQHQVVALDIVAEKVAMLNQRKSPINDAEIERFLQHETLNFSATLDKHEAYADAQFVIIA TPTDYDPHTNYFNTSSVEAVIRDVLAINPQAIMVIKSTVPVGFTEKISQQLDTDNIIFSPEFLREGKALYDNLYPSRIVV GERSERARFFANLLMECALKKDIRVLFTDPTEAEAIKLFANTFLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN YYNNPSFGYGGYCLPKDTRQLLANYRTVPNNLIKAIVDANHTRKDFIADTIIRRHPKTVGVHRLIMKAGSDNFRFSSIQG IMKRIKAKGINVVVYEPGIDDDDFLDFPVIHQLDSFKQQCDIIITNRYADELKDVIGKVYTRDLFGED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0068 | YP_300158.1 | UDP-glucose 6-dehydrogenase | Not tested | SCC15305cap | Protein | 8e-93 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_2929 | YP_003018488.1 | nucleotide sugar dehydrogenase | VFG0963 | Protein | 2e-95 | 54 |
