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Name : PC1_2901 (PC1_2901) Accession : YP_003018461.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : 1.1.1.22 Position : 3276793 - 3278097 bp Length : 1305 bp Strand : - Note : KEGG: cbs:COXBURSA331_A1105 UDP-glucose/GDP-mannose dehydrogenase family protein; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogena DNA sequence : ATGGCAGAGAATAGAATAGGAAGTCATATTGTTGCAGTTATTGGGTTGGGCTATATAGGCCTACCTGTAGCTTGTGAGTT TTCTAAATACTTCAATGTTATAGCCTATGATTGCAACCGAATCAGAGTTGAACAGCTGAGTAACAATATAGACTCAACTG GGACAAATTCATACGGATGTAGGAATGAGAAAAACATAAAATGGACTAACGATGAATATGATATTGAATTTGCTGATTTT TTTATAGTTTGCGTTCCTACACCTGTCGATATAAACAACAAACCAGACATAACATGTCTGATAAAAGCAACAAAAACTGT TGGTCATTATTTAAGAAAAAATAGCATAGTTGTATATGAGTCTACTGTATCGCCGGGAACAACTGAAGAAGTATGCCAAC CACTTCTTGAGAAATATGCACAACTGAAATCTGGAAAAGATTTTTTTATTGGATTTAGTCCTGAAAGATTGTGCCCAGGG GATGATCTTCACTCCTTAGTAAATACAGATAAAATTGTATCATGTGCTCATGAAAACGGATTGCAGAAAATTTTCATGGT ATATAATCATGTGTATAAAAAAGGAATACACAAAACCTCAAGTATTAGAAGTGCAGAGGCTGCTAAAATATTAGAAAACA TACAAAGAGATGTTAATATTGCACTAATCAATGAAGTGCATGAGGTTTTTCAAAAAGATAACATAGATACTTATGAAGTT ATACGTCTAGCTTCAACAAAATGGAATTTTGGGAAATACTTCCCCGGTCTTGTTGGAGGTCATTGCATAAGTGTTGACCC ATACTATTTTATTGATTATGCAAATAAATCTGGGCATCCTGTCCCATTAGTAAGTGTATCGAGAAGGATTAATGAGGACA AAAAAGACATTATCATTGAGAAAGTCAATTTATTCATAAAAAATAATAAAATTACGAACCCTAAGATTGCCATCTTTGGA GTTACGTATAAAGAAAACTGTACAGATACGAGGAATTCGAAATCTTTATTGATTTATCAATCTCTTGTTAATAGTGGGTA TGAGGTTCATTTAAATGATATTAAATTACTGAACAAATCGAAATGCACTACTAATTACGATATAAATCTCACGTCGCTCG AAGACATATCTGGCTGTGATATTCTTATCATTTGCGTTGCTCATGATGAGTATAAAAGAATGATTCTTTCAGACTATAAA AAAATTATTAACAATGAGTCTTTGATTATAGATATGAAAAATGTAATCAATGAATCGCTAAACTTACAACTCTCTGAGCA TAAGATTCATTTAATTAAAGGATAA Protein sequence : MAENRIGSHIVAVIGLGYIGLPVACEFSKYFNVIAYDCNRIRVEQLSNNIDSTGTNSYGCRNEKNIKWTNDEYDIEFADF FIVCVPTPVDINNKPDITCLIKATKTVGHYLRKNSIVVYESTVSPGTTEEVCQPLLEKYAQLKSGKDFFIGFSPERLCPG DDLHSLVNTDKIVSCAHENGLQKIFMVYNHVYKKGIHKTSSIRSAEAAKILENIQRDVNIALINEVHEVFQKDNIDTYEV IRLASTKWNFGKYFPGLVGGHCISVDPYYFIDYANKSGHPVPLVSVSRRINEDKKDIIIEKVNLFIKNNKITNPKIAIFG VTYKENCTDTRNSKSLLIYQSLVNSGYEVHLNDIKLLNKSKCTTNYDINLTSLEDISGCDILIICVAHDEYKRMILSDYK KIINNESLIIDMKNVINESLNLQLSEHKIHLIKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-73 | 42 |
