Gene Information

Name : PC1_2889 (PC1_2889)
Accession : YP_003018451.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : YagBYeeUYfjZ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3266478 - 3266813 bp
Length : 336 bp
Strand : +
Note : PFAM: YagBYeeUYfjZ family protein; KEGG: eca:ECA2854 hypothetical protein

DNA sequence :
ATGCCATTGTCTGATTCCCCGGAATGGGGACTAAAACGTGCCGTTACTCCACAGTTCGGAGCCAGGCTGGTTCAGGAAGG
TCACTATCTTCATTATCTGTCAGATCGGGCCAGCATTGTCGGTACGTTTAGCAAAACAGAAGCCCAAAGTCTGGAATGTT
GCTTCCCTGAGCTGATTAAGCTGTTGGAGCAGAAGCTACGCACGGGTGAACTGAATCCCCGCCAGCAGGGCTGCATCACG
CTGCATTGCAACAAGTGGACCTGTGAAGCCGATACGCTGGGCAGTTTTGGCTACGTGTATATTGCTATTTATCCCTCTTC
AGCGGCAACACAATAA

Protein sequence :
MPLSDSPEWGLKRAVTPQFGARLVQEGHYLHYLSDRASIVGTFSKTEAQSLECCFPELIKLLEQKLRTGELNPRQQGCIT
LHCNKWTCEADTLGSFGYVYIAIYPSSAATQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-22 62
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-22 62
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 2e-21 61
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 2e-21 61
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 1e-21 61
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 3e-21 59
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 9e-21 59
Z1220 NP_286755.1 structural protein Not tested TAI Protein 8e-21 59
Z1658 NP_287161.1 structural protein Not tested TAI Protein 8e-21 59
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 3e-22 58
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 3e-21 58
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 2e-21 58
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-20 58
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 3e-21 58
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 2e-20 57
unnamed AAL08477.1 unknown Not tested SRL Protein 5e-20 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_2889 YP_003018451.1 YagBYeeUYfjZ family protein VFG0662 Protein 5e-22 61
PC1_2889 YP_003018451.1 YagBYeeUYfjZ family protein VFG1619 Protein 1e-22 58
PC1_2889 YP_003018451.1 YagBYeeUYfjZ family protein VFG1681 Protein 6e-22 58
PC1_2889 YP_003018451.1 YagBYeeUYfjZ family protein VFG1068 Protein 2e-20 57