|
Name : PC1_2882 (PC1_2882) Accession : YP_003018444.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : HSR1-like GTP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG3596 EC number : - Position : 3261666 - 3262541 bp Length : 876 bp Strand : + Note : PFAM: GTP-binding protein HSR1-related; KEGG: ecd:ECDH10B_0238 CP4-6 prophage; GTP-binding protein DNA sequence : ATGCCCAACCACGAGAATCTGCGAGAGATACAGGCGTCACTGTCAGTATTGCCAGATAGCCTGCATCAGCGCGTCATTGA CCACATTGAACAACTGATCCAATACGAGCCCGTCATCGGCATTATGGGGAAAACCGGTGTGGGTAAATCCAGCCTGTGTA ATACACTGTTTCAGGGGGAAGTGTCCCCGGTCAGTGATAACAGTGCCTGCACCCGGCAGGCTCTTACGTTCCGGCTGTCA TCAGGGCAACGCAGCATCCTGTTTGTCGATTTACCCGGTGTCGGTGAGAGTGAGGAGCGGGACCGTGACTATGCTGAACT CTACCAGAGCTGGCTACCGCGCGTTGATATTGTCCTCTGGTTGCTTAAAGCCGATGACCGTGCGCTTGCCATTGACCAGC ATATTTATCGTACCGTTATCGGTGAGCGCTACCGTGACAAAGTACTGTTTGTCCTGAATCAGGTGGATAAGCTGGAGCCT TGCCACGAATGGGACAGGGACACACAGCGACCCTCACTCAATCAGTCCGGCAATATCTATGCTCGTCGCGTCGCCGTGCG TTCTACCCTCTTTCCGACCCATCCGGTCTGCGCCGTGTCGATAAAAACCGGATGGGGCATGGCAGCAATGGTGGAGGTGC TGTTTCAGTGTTTACCGCCTAAGGCCAGTAGTCCGCTGTCAGTACGCTTACAGCCTGACTGGCGTTCAGTGGCTATTGAG AACCGGGCTCAGGATGATTTTGCCCAGTCGGTTGGCGACGTACTTGATAGCGTGATTGCGCTGCCTGTCGTCCCCGCACC ACTAAAAATACTTATCGGCGGCCTCAAACAAACCGTGGTGTCACTCGCCCGTTCATTGTGGTCCTTGCTGTTCTAG Protein sequence : MPNHENLREIQASLSVLPDSLHQRVIDHIEQLIQYEPVIGIMGKTGVGKSSLCNTLFQGEVSPVSDNSACTRQALTFRLS SGQRSILFVDLPGVGESEERDRDYAELYQSWLPRVDIVLWLLKADDRALAIDQHIYRTVIGERYRDKVLFVLNQVDKLEP CHEWDRDTQRPSLNQSGNIYARRVAVRSTLFPTHPVCAVSIKTGWGMAAMVEVLFQCLPPKASSPLSVRLQPDWRSVAIE NRAQDDFAQSVGDVLDSVIALPVVPAPLKILIGGLKQTVVSLARSLWSLLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1650 | NP_287153.1 | hypothetical protein | Not tested | TAI | Protein | 7e-57 | 46 |
| unnamed | AAL08471.1 | unknown | Not tested | SRL | Protein | 3e-59 | 46 |
| Z1210 | NP_286745.1 | histone | Not tested | TAI | Protein | 7e-57 | 46 |
| unnamed | CAD66199.1 | hypothetical protein | Not tested | PAI III 536 | Protein | 1e-58 | 45 |
| sap | NP_708764.1 | hypothetical protein | Not tested | SHI-1 | Protein | 5e-57 | 45 |
| sap | NP_838477.1 | hypothetical protein | Not tested | SHI-1 | Protein | 2e-57 | 45 |
| ECO103_3582 | YP_003223441.1 | hypothetical protein | Not tested | LEE | Protein | 3e-59 | 45 |
| unnamed | AAK00473.1 | unknown | Not tested | SHI-1 | Protein | 4e-57 | 45 |
| aec64 | AAW51747.1 | Aec64 | Not tested | AGI-3 | Protein | 1e-58 | 45 |
| yeeP | ADD91709.1 | YeeP | Not tested | PAI-I AL862 | Protein | 1e-58 | 45 |
| unnamed | AAL99256.1 | unknown | Not tested | LEE | Protein | 1e-57 | 44 |
| yeeP | CAE85196.1 | YeeP protein | Not tested | PAI V 536 | Protein | 3e-58 | 44 |
| APECO1_1093 | YP_853113.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 4e-57 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_2882 | YP_003018444.1 | HSR1-like GTP-binding protein | VFG1062 | Protein | 2e-59 | 46 |
| PC1_2882 | YP_003018444.1 | HSR1-like GTP-binding protein | VFG1674 | Protein | 7e-59 | 45 |
| PC1_2882 | YP_003018444.1 | HSR1-like GTP-binding protein | VFG0654 | Protein | 2e-57 | 45 |
