Gene Information

Name : PC1_2879 (PC1_2879)
Accession : YP_003018442.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3259161 - 3259742 bp
Length : 582 bp
Strand : -
Note : KEGG: ecy:ECSE_0284 hypothetical protein

DNA sequence :
ATGGATTTCCCATACCCTTACAACCGTAACTACACGATGAACTGGTTCCTACTTTCGTTACTTAATGACCACCTTAATCA
ACTGCTAGCACGTTACTCTCGCCTGCAACCCATCAGGATCGATCTATTTTATCGGAAAGGTTCATGGCGTTATCTCCATC
ATGGGATGAAGCAAGCTGAATGTGAGGTTCGCCAGTTGACTGAAATGATGATGCGTCAAGGCAAACTCGTTGGATACTTC
TGGGTACTGGAGTTTACCAGCCGTCATGGGTGTCATGCTCACATCGTGATGTATCTCAATAGACACAATAACCAGGCTAC
ATACCCGGTAGCAGAACAGGTTGGAGCACTGTGGCAGGAAATAACGGAAGGCCAAGGTTACCACAACCGGTGTGATCGTA
AAGCCAGCTACGAAGCTGATATAACCCAGCCAGTTAATTACGATGATTACCTTGCTATCAATGGCCTACGCTACATTATC
AGCTATCTGGCGAAAGAAGAGCAAAAGCACGGTGATTATTACTACGGATCCAATGAAATCCCTGCACCCAGCAAGTTAGG
ACGACCACGAGGTAGCCACTAA

Protein sequence :
MDFPYPYNRNYTMNWFLLSLLNDHLNQLLARYSRLQPIRIDLFYRKGSWRYLHHGMKQAECEVRQLTEMMMRQGKLVGYF
WVLEFTSRHGCHAHIVMYLNRHNNQATYPVAEQVGALWQEITEGQGYHNRCDRKASYEADITQPVNYDDYLAINGLRYII
SYLAKEEQKHGDYYYGSNEIPAPSKLGRPRGSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33737.1 hypothetical protein Not tested PAI I 536 Protein 5e-25 41
unnamed CAD42062.1 hypothetical protein Not tested PAI II 536 Protein 7e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_2879 YP_003018442.1 hypothetical protein VFG1478 Protein 2e-25 41
PC1_2879 YP_003018442.1 hypothetical protein VFG1581 Protein 3e-25 41