Gene Information

Name : PC1_2857 (PC1_2857)
Accession : YP_003018422.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3229730 - 3230203 bp
Length : 474 bp
Strand : -
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: eca:ECA3106 general secretion pathway protein G

DNA sequence : 
ATGCAACAGTCTCAGCGTAGTTGTGGACAAAAAAATAGTTATGGTCAGCATGGTTATGGCCAGCGTGGTTTTACCCTGTT
GGAAATTATGGTGGTAATCGTCATTCTCGGCGTACTGGCGAGTCTGGTGGTACCCAATCTGATGGGGAATAAGGAAAAAG
CGGATCGGCAAAAAGCCGTCAGCGATATTGTGTCTCTCGAAAGCGCACTCGACATGTACAAGCTGGATAACAACCGTTAC
CCGTCCACGGAGCAGGGACTGAAAGCGCTGGTGACGAAGCCAACCGTTCAGCCGGAACCGCGTAACTACCCAGCCGATGG
TTATATCCGCCGCTTACCACAGGATCCGTGGGGCTCGGAGTATCAACTGTTGAACCCTGGTCAGCACGGTAAGCTGGATA
TCTTCTCTCTGGGGCCAGATGGCATGCCGGGAACGGAAGATGATATCGGCAACTGGAATTTGGATAAAAAATAA

Protein sequence : 
MQQSQRSCGQKNSYGQHGYGQRGFTLLEIMVVIVILGVLASLVVPNLMGNKEKADRQKAVSDIVSLESALDMYKLDNNRY
PSTEQGLKALVTKPTVQPEPRNYPADGYIRRLPQDPWGSEYQLLNPGQHGKLDIFSLGPDGMPGTEDDIGNWNLDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-43 68
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-43 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_2857 YP_003018422.1 general secretion pathway protein G VFG2050 Protein 6e-44 68
PC1_2857 YP_003018422.1 general secretion pathway protein G VFG0180 Protein 2e-34 57
PC1_2857 YP_003018422.1 general secretion pathway protein G VFG1871 Protein 1e-33 54