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Name : PC1_2758 (PC1_2758) Accession : YP_003018324.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 3128246 - 3129937 bp Length : 1692 bp Strand : + Note : KEGG: eca:ECA3014 trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : ATGACTACCTCGCTACCCTGGTGGCAAAACGGCGTAATTTATCAAATCTACCCGAAGAGCTTTCAGGACAGTACCGGAAA TGGGATTGGCGACATCGCCGGCATCACTGCACGACTCGATTACCTGCAACAACTAGGCGTTGATGCGATCTGGCTGACTC CGGTTTATCTTTCCCCTCAGGTTGATAACGGTTATGACGTCGCCGATTACTGTGCCATCGACCCAACCTACGGCACGATG GCCGATATGGAAACGTTGATTGCAGAAGCACATCGCCGTCGTATTCGCGTCGTCATGGATATGGTGTTCAACCACACCTC TACGCAGCACCACTGGTTCCTGAACGCACAGGATCGCCGTAGTCCCTATCGACATTTTTACATCTGGCGTGATGGCAATG ACGGTGCGCTACCCAATAACTGGCGTTCAAAATTTGGCGGCCCAGCCTGGCAGTGGCACGCGGAGAGCAAACAGTATTAC CTGCACCTTTTCGCCACTGAACAGGCTGACCTGAATTGGGAACACCCACGTGTACGGGATGAATTAAAGCAGGTCTGTGA ATTTTGGGCGGACAAAGGTGTAGACGGACTGCGGCTGGATGTGATCAATTTGGTCTCTAAGCAACAGAATTTCCCGTCAG ACGCTCAGGGCGATGGACGCCGTTTCTACACCGATGGACCATTGATTCATGATTACTTGCAGGAATTCAGCCGGGATGTT TTTCAGCCCCGCGGTTTAATGACCGTCGGCGAGATGTCATCGACCTCGCTGGAGCACTGCCGTCGCTACGCCGCGTTGGA CGGTAGTGAACTCTCCATGACGTTCAATTTTCACCATTTGAAAGTCGATTATCCCAATGGGGAAAAATGGACGCTGGCAG AACCTGATTTCATCCAGCTCAAGCAGATCTTTACTCACTGGCAGCAGGGTATGCACAACCATGCCTGGAATGCGCTGTTC TGGTGTAATCACGATCAGCCGCGTATCGTGTCGCGTTTTTGCGATGAAGGCGAATTCCGCGTGCAATCCGCCAAAATGCT GGCGATGGTGCTTCACGGCATGCAGGGCACGCCCTATATCTATCAGGGCGAAGAACTGGGGATGACCAATCCCGGCTATA CGCAGATTGAACAATACCGGGATATTGAAAGCCTGAATCAATTTGCTGAACAGCGCGAGCGGGGTCAGCCAGATGCACAA ACCTTGGCAATCCTCGCCAGCAAATCACGCGATAACGGCCGTACACCGATGCAATGGGATGCCAGTAACCATGCCGGATT TACGACCGGCACACCGTGGATAGCACCGTGTCAAAACTTTGCCCACGTCAACGCAAAGCAAGCATTGGCAGATAAAGCGT CCGTTTTCTACACCTATCAACAGCTTATCGCTATGCGTAAAGCGCTACCATTACTGACATACGGAGACTATCAGGATTTG CTGCCAGACCATCCCAGCATCTGGTGCTATCAGCGTATCTGGGAAGAACAACGGCTTCTGGTGCTGGCAAATCTCAGTAA ACAGCCTCTGCGCTGGCAGCCTCCCATTGATATCCACGGCCGCCGCTGGCGACTGTTATTCAGCAATTACTCTGATGCTC AACCTCAACCCGCAATACTGGAGCTACGTCCGTTTGAAGCCATATATTGGGTACAAGGCATGCAGGAGAAAGAGGATAAG ATTCAGGAATAG Protein sequence : MTTSLPWWQNGVIYQIYPKSFQDSTGNGIGDIAGITARLDYLQQLGVDAIWLTPVYLSPQVDNGYDVADYCAIDPTYGTM ADMETLIAEAHRRRIRVVMDMVFNHTSTQHHWFLNAQDRRSPYRHFYIWRDGNDGALPNNWRSKFGGPAWQWHAESKQYY LHLFATEQADLNWEHPRVRDELKQVCEFWADKGVDGLRLDVINLVSKQQNFPSDAQGDGRRFYTDGPLIHDYLQEFSRDV FQPRGLMTVGEMSSTSLEHCRRYAALDGSELSMTFNFHHLKVDYPNGEKWTLAEPDFIQLKQIFTHWQQGMHNHAWNALF WCNHDQPRIVSRFCDEGEFRVQSAKMLAMVLHGMQGTPYIYQGEELGMTNPGYTQIEQYRDIESLNQFAEQRERGQPDAQ TLAILASKSRDNGRTPMQWDASNHAGFTTGTPWIAPCQNFAHVNAKQALADKASVFYTYQQLIAMRKALPLLTYGDYQDL LPDHPSIWCYQRIWEEQRLLVLANLSKQPLRWQPPIDIHGRRWRLLFSNYSDAQPQPAILELRPFEAIYWVQGMQEKEDK IQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 5e-125 | 43 |
