|
Name : PC1_0265 (PC1_0265) Accession : YP_003015860.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : succinic semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 312266 - 313720 bp Length : 1455 bp Strand : + Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: eca:ECA0280 succinate-semialdehyde dehydrogenase [NADP+] DNA sequence : ATGTCAGGACAAAATTTGCAGGATCATGAACTGTTCAAAACGGGCTACTTTGCGGCGGGAAAATGGCAGCAAGGCACAGC CACCTTCGAGGTAGTGAATCCGGCGACGGGTGAGACTATTGCCAGCGTAGCAAAAGCGGGGAAGAAAGAGACGCAGGCGG CGATTGACGCTGCCTATGCCGCCTTTCCCGCCTGGAAACGTAAAACCGCGAAGGAACGCTCTGAAATTCTGTATCGCTGG TACGAGCTGATTCTGGAGAATAAGCGCTATCTGGCGGAGCTGATGACTGCCGAACAGGGCAAGCCAGTGCAGGAGGCAGA AGGTGAGGTTGTCTATGCGGCGAGTTTCATTCAGTGGTTTGCTGAGCAGGGCAAGCGGGCTAACGGTGAGATTATTCCAT CTGCGAAACCCGGATCGAAGATTTATGCCACGCGTGAACCCGTTGGCGTCGTTGTTGCCATTACACCGTGGAATTTCCCG CTGGCGATGCTGACACGTAAGCTGGGGCCAGCGCTGGCCGCAGGGTGTACTGGCGTCATCAAACCCGCGAACAACACGCC GCTGTCTGCGTTTGCGCTGCTGGCACTGGCGCAGCAGGCAGGTGTGCCGGATGGAGTACTTAACGGCGTGGCGGGCGATA CGCAGGCGATCAGCGATACCGTCATGGCAAGCGATAAAGTGCGCAAAATTTCTTTCACCGGCTCAACGACGGTAGGGAAA ACGCTGGTGCGTAACGCGGCTGACACTATGAAGAAAGTGTCGATGGAACTGGGTGGGAACGCACCTTATATCGTGTTTGA CGATGCGGATATTCAGGCTGCAGTAAAAGGTGCGATTGCTAACCGTTTCCGTAACGCAGGTCAGGTTTGCGTCAGTGCCA ATCGGTTTTATATTCAGGATGGTGTCTACGATGAGTTTGTCTCTCTGCTCGCGGAAGAAGTGAAAAGGCTTAAAGTCGGT AACGGCATGGATGACGGCGTTGTACTGGGTCCGCTAATTGATGATGCGGCTGTCGAGAAGGTAGAGAAGCACGTCAATGA TGCGGTGGAAAAAGGCGGTAAGGCACTGGTCGGTGGTCAACGGCACAAGCTGGGTCACAGCTTCTTTGAGCCGACGGTGA TTGTTGATGCCAATGAAGCGATGTTGCTTGCGCAGGAAGAAACGTTTGGTCCGGTCGCTCCGTGTTTCCGCTTCAAAACG GAAGAAGAGGTGATTGAGCGTGCGAATAATACGCCATTTGGCTTGGCAGCCTACTTCTACAGCCAGAATTTGCAGCGTGT GTTCCGCGTGGCAGAAGCACTTGAGAGCGGCATGGTGGGTATTAACGAATGCGCGGTTTCAACCGAACTGGCGCCATTTG GCGGTGTGAAAGAGTCAGGATTAGGTCGCGAAGGATCGGTTCTGGGACTGGATGAGTTTCTGGAAGTAAAAACCTGGCAT CTGGGCGGATTGTAA Protein sequence : MSGQNLQDHELFKTGYFAAGKWQQGTATFEVVNPATGETIASVAKAGKKETQAAIDAAYAAFPAWKRKTAKERSEILYRW YELILENKRYLAELMTAEQGKPVQEAEGEVVYAASFIQWFAEQGKRANGEIIPSAKPGSKIYATREPVGVVVAITPWNFP LAMLTRKLGPALAAGCTGVIKPANNTPLSAFALLALAQQAGVPDGVLNGVAGDTQAISDTVMASDKVRKISFTGSTTVGK TLVRNAADTMKKVSMELGGNAPYIVFDDADIQAAVKGAIANRFRNAGQVCVSANRFYIQDGVYDEFVSLLAEEVKRLKVG NGMDDGVVLGPLIDDAAVEKVEKHVNDAVEKGGKALVGGQRHKLGHSFFEPTVIVDANEAMLLAQEETFGPVAPCFRFKT EEEVIERANNTPFGLAAYFYSQNLQRVFRVAEALESGMVGINECAVSTELAPFGGVKESGLGREGSVLGLDEFLEVKTWH LGGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-127 | 58 |
