|
Name : PC1_2665 (PC1_2665) Accession : YP_003018231.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : late control D family protein Function : - COG functional category : R : General function prediction only COG ID : COG3500 EC number : - Position : 3021085 - 3022218 bp Length : 1134 bp Strand : + Note : PFAM: late control D family protein; KEGG: yen:YE1644 regulator of late gene expression DNA sequence : ATGTCAATCATGGACACGCTAGGGGCTATTTCTGGACGGCTGGACGAATACTCACCCCGTCCGGCGTTTATGGTGAGGGT TGGCGATAAGCAAGTTACAGAGCTGAATGATCGGCTGATGTCATTATCGCTGACGGATAATCGCGGGTTTGAAGCTGACT CACTCGAATTAGTGCTGGACGATGCAGACGGAAAATTAGCCCTGCCGGAGCGCGGTGCAAAGGTCACGGTGGCGCTGGGC TGGGCGAATGAACCGCTAATCAGCAAAGGGACATTCACGGTTGATGAAATTGCGCATCGTGGCCCGCCGGATCAGTTGAC TATCAGCGCCCGCAGCGCGGATTTCAGAGAAACATTTAACGTTAAGCGTGAATACAGTTGGCACAATGTGACCGTCGGGT TTGTGGTATCTGCCATTGCCAGCCGTTACGGACTGAAAGCCGGTGTGACAGAACGGCTGTCGAAGCTGGAACTTGACCAT GCTGACCAGACGAATGAATCAGATATCAGCTTCCTCACACGTATGGCAGAAATGGTTGGGGCAATCACAACCATAAAAAA CGGTATGTTGCTGTTTATTGTTCCAGGGCAGGCGGTTTCACAAAGTGGCAAGCCACTACCGGCCATCACCATTACACGCA GTAGCGGAGACAGTCACAGCTTCCGCGTTGCTGACCGCGACGCGTACACCGGCGTGACCGCGTACTGGCTGGATCTGAAT TTTGGCAAGACCAAAACGACAAAGGTAAAAAATAAACGCAAAACCAGTACGCCAGCTAAAAAGAAAGAACCCGCATCCAG CAGTAAAGAGGGGAATTATCTGAAGGGAACGGAAGGTAATGTTTATGTCATGCGTTCGACGTTTAAAACCGAGCAAGCGG CAAAACGTGCAGCCGCAGCGAAATGGTCGAAGTTACAACGCGGTGCCGCAGAATTCAGTATGACGTTAGCGCGAGGCCGT GCCGATTTATATCCCGAATTACACGCCCGTATGTCTGGATTTAAAACGGTTATCGACAATGCCGATTGGATAATTACACG CTGCGTACATGAAATCAGCCAATCAGGATTTACGACATCGCTGGAATTTGAAGTGAAAATAACGGATTGGGCAGCAGACG ATAATGATGATTAA Protein sequence : MSIMDTLGAISGRLDEYSPRPAFMVRVGDKQVTELNDRLMSLSLTDNRGFEADSLELVLDDADGKLALPERGAKVTVALG WANEPLISKGTFTVDEIAHRGPPDQLTISARSADFRETFNVKREYSWHNVTVGFVVSAIASRYGLKAGVTERLSKLELDH ADQTNESDISFLTRMAEMVGAITTIKNGMLLFIVPGQAVSQSGKPLPAITITRSSGDSHSFRVADRDAYTGVTAYWLDLN FGKTKTTKVKNKRKTSTPAKKKEPASSSKEGNYLKGTEGNVYVMRSTFKTEQAAKRAAAAKWSKLQRGAAEFSMTLARGR ADLYPELHARMSGFKTVIDNADWIITRCVHEISQSGFTTSLEFEVKITDWAADDNDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4601 | NP_458684.1 | putative regulator of late gene expression | Not tested | SPI-7 | Protein | 1e-80 | 54 |
| t4295 | NP_807892.1 | regulator of late gene expression | Not tested | SPI-7 | Protein | 1e-80 | 54 |
| unnamed | ABR13490.1 | phage late control D | Not tested | PAGI-6 | Protein | 1e-46 | 43 |
