Gene Information

Name : PC1_2663 (PC1_2663)
Accession : YP_003018229.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : phage major tail tube protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3498
EC number : -
Position : 3019209 - 3019724 bp
Length : 516 bp
Strand : -
Note : TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: yen:YE1646 major tail tube protein

DNA sequence :
ATGTCTCTGCCAAAGAAACTTAAATACTTCAATCTGTTTATCGACGGTGACAACTATTTCGGCCAGGTGCCGGAAGTGAC
ACCGCCCAAACTCACGCGCAAGACGGAAGACTATCAGGCGGGCGGCATGCCTGGCTTTGTCGCGATTGACTTCGGTTTTG
ATGCGGGCGCGCTGGATATGGAAATCACCCTCGGCGGGCTGGATGCTGGCTTGTTGAAAAAGTGGGGCGTCTCCACTGCG
GACGGTATGCAAACGCGCTTTGCCGGTTCGTATCAGGATGAAGCCACAGGCGAAGCGGTGCCGTGTGAAATCCAGACGCG
TGGCCGGTTTACCGAGCTTGACCCAGGCTCTGCAAAAGTGGGTGAAGATACGGCACATAAATACACCCTGAAAAATACCT
ACTTCAAGCTGACGATCAGCGGTGAAGAGGTCATGGAAGTGGATGTGCTGAACATGATTTATAAAGTGGCCGGTGTCGAT
ATGCTGGAAAAACACCGCGCTAACGTTGGGTTATAA

Protein sequence :
MSLPKKLKYFNLFIDGDNYFGQVPEVTPPKLTRKTEDYQAGGMPGFVAIDFGFDAGALDMEITLGGLDAGLLKKWGVSTA
DGMQTRFAGSYQDEATGEAVPCEIQTRGRFTELDPGSAKVGEDTAHKYTLKNTYFKLTISGEEVMEVDVLNMIYKVAGVD
MLEKHRANVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4606 NP_458689.1 probable major tail tube protein Not tested SPI-7 Protein 1e-32 51
t4300 NP_807897.1 major tail tube protein Not tested SPI-7 Protein 1e-32 51
unnamed ABR13485.1 phage tail tube protein Not tested PAGI-6 Protein 2e-33 47