Gene Information

Name : PC1_2654 (PC1_2654)
Accession : YP_003018220.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : Baseplate J family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 3010163 - 3011074 bp
Length : 912 bp
Strand : +
Note : PFAM: Baseplate J family protein; KEGG: spe:Spro_0867 baseplate J family protein

DNA sequence :
ATGAGCGGATTGATTGATTTATCCTTGCTGCCTGCCCCTGATGTCGTTGAAACACTGGACTACGAAACGTTGTATGCGGA
ACGCAAGGCGATGTTTATCGCTCTGTTTCCAGTCGAGCAACGTGATGCCATCACACGCACGCTGGCGCTGGAATCTGAGC
CGCTAACCAAGCTGCTGCAACTGTCTGTCTATCATGAACTGTTATTGCGTCAGCGAGTTAACGAAGCGGCCAGCGCTAAC
ATGCTGGCTTACGCCGCCGGAAGCGATCTGGATCAGCTAGCGGCTAACGTCAATGTGCAACGTTTGGTTATCACAGCAGA
AGATACAACGGCGATCCCCCCCATTGAAGCAGTCATGGAGTCTGATGCCGATCTGCGTACCCGTACGCAACAGGCATTTG
AGGGGCTGAGTGTTGCGGGGCCAACCGCAGCCTATGAATTTCATGCCCGTAGTGCCGATGGGCGAGTCGCTGACGCCAGC
GCAGTCAGCCCCAGCCCTGCCGCCGTCACGGTCACCGTGCTGTCGCGTGAAGGAAATGGCAGCACCAGTGATGAATTATT
GCAAGCCGTTGATGCTGCACTGAACGCCGAGAACGTGCGGCCGGTTGCAGACCGTGTAACCGTTCAATCCGCCGTCATCA
TCCCTTATGAAATTGCCGCAACGTTGTATGTCTATCCTGGGCCAGAAGCCGAACCTATCCGCATCGCCGCAGAAGCCCGC
TTGCAGACGTATATCACCGCACAGCATCGGTTAGGCCGTGATATCCGCCGCTCTGCAATCTTCGCTGCACTCCATGTTGA
AGGTGTACAACGTGTTGATCTGGAAAGTCCTGCCGCCGATATCGTGCTGGATAAAAGCCAGGCATCTTACTGCGCTAACT
GGGTGCTGAATATCGGGGGATCAGATGAATAA

Protein sequence :
MSGLIDLSLLPAPDVVETLDYETLYAERKAMFIALFPVEQRDAITRTLALESEPLTKLLQLSVYHELLLRQRVNEAASAN
MLAYAAGSDLDQLAANVNVQRLVITAEDTTAIPPIEAVMESDADLRTRTQQAFEGLSVAGPTAAYEFHARSADGRVADAS
AVSPSPAAVTVTVLSREGNGSTSDELLQAVDAALNAENVRPVADRVTVQSAVIIPYEIAATLYVYPGPEAEPIRIAAEAR
LQTYITAQHRLGRDIRRSAIFAALHVEGVQRVDLESPAADIVLDKSQASYCANWVLNIGGSDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 1e-87 67
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 1e-87 67
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 8e-56 59