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Name : PC1_2643 (PC1_2643) Accession : YP_003018209.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : phage major capsid protein, P2 family Function : - COG functional category : - COG ID : - EC number : - Position : 3003984 - 3005033 bp Length : 1050 bp Strand : + Note : TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; KEGG: yen:YE1676 major phage capsid protein precursor DNA sequence : ATGAAGAATGAAACCCGCGTTTTGTACGACGCTTACATTAACCGCCAGGCTGAGCTTAACGGCGTCCAACCTGATCACGT TACCAAGCAGTTCAGTGTTGCACCGTCAATCCAGCAAAAGCTGGAAGATAAGGTTCAGCAATCCAGCGAGCTGTTGCAAA AAATCAACATCACCGGTGTATCCGATCAAGAGGGGCAAAAGCTGGGGTTAGGTATCAGCGGCCCTATTTCAAGTTCGAAC ACATCAAGCACCGATCGACGTGAGCCGAAATCGGTTCACACGATGGATGATGATAAATTCCGCTGTGAGCAAACCAATAC GGATACGTTTATCAGCTATCCGCAGTTGGATATGTGGGCCAAATTCCCCGACTTTCAGCAGCGCATTAGCAATCAGATCA TCAAACGTAAAGCGCTTGATCGCATCATGATTGGTTTTAACGGTACGTCGCGTGCCGCTAAATCTGATCTGGCAGCCAAC CCGCTGTTGCAGGATGTGAATATCGGCTGGCTGGAGAAATATCGCCTCCATGCTGCACAGCGCGTGATGAAAAACATCAC CGTCACCAGCCGTGATGATGAAAATAAAGTCATCGCGAAGGGGGATTACGGCAACCTCGACGCCGTGATCTATGACGCCG TTAACTCACTGCTGGATGAGTGGTTTAAGTCATCACAAGATTTGGTGGTCATTTGTGGCCGTCAGATCATGGTCAGCAAA GAATACCCGCTGATTAACGCCATCAACACCAACAATCCTAACTCTGAATCGTTGGCCGGTCAGTTGCTGGTATCGCGTAA GGCTATCGGCAATCTGCCAACCTTCATTGCGCCGTCTTTCCCTGATGGCAGCATGTTCGTGACCCCGTTTAGCAATCTGT CGATCTACTGGCAGGAAGATAAGCAGCGCCGCGCCGTGCGTGATGAACCTGAGCGCAATCGTATTGCGACCTACGAGTCA TCCAATGACGCCTATGTCATTGAAGACTATGGCACCGGATGCCTGATTGAAGGCATTACGTTTGCCGCGGCAGCACCGGC GCAAGGCTAA Protein sequence : MKNETRVLYDAYINRQAELNGVQPDHVTKQFSVAPSIQQKLEDKVQQSSELLQKINITGVSDQEGQKLGLGISGPISSSN TSSTDRREPKSVHTMDDDKFRCEQTNTDTFISYPQLDMWAKFPDFQQRISNQIIKRKALDRIMIGFNGTSRAAKSDLAAN PLLQDVNIGWLEKYRLHAAQRVMKNITVTSRDDENKVIAKGDYGNLDAVIYDAVNSLLDEWFKSSQDLVVICGRQIMVSK EYPLINAINTNNPNSESLAGQLLVSRKAIGNLPTFIAPSFPDGSMFVTPFSNLSIYWQEDKQRRAVRDEPERNRIATYES SNDAYVIEDYGTGCLIEGITFAAAAPAQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 6e-74 | 48 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 6e-74 | 48 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 1e-70 | 47 |
