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Name : PC1_2640 (PC1_2640) Accession : YP_003018206.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : phage portal protein, PBSX family Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 3000175 - 3001242 bp Length : 1068 bp Strand : - Note : TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; KEGG: yen:YE1679 putative portal vertex protein DNA sequence : ATGTCACGTAAGAAACAGCACCCGCGCACGGCCAATCTACGCGCCCCAGCCGCACAGACGCCCGTAACAGGGGAATTAAT CCAACAGCCGATTGAGTCACTACAGTCTTTCTCATTTGGTGACGCACAGCCCATCATGGACAGGCGCGACCTGTTGGACT GCATGGAGTGCGCCAGAAATGGCCGCTGGTATGAACCACCGATCAGCACCTACGGTCTGGCGCGAATGTTTGACGTTGCC GTGCATCATCAGTCACCGATACTGTTCAAACGCAATGTCATCATGTCCTGCTACGAGCCACACCCGCTGTTATCACGGCA GGATGCCAGCGCCTTTGTACTCGACTGGCTGGTATTCGGTAACGCTTATCTGGAACTGAGAAAGAACCGTTTCGGCCAAC CACTGAAGCTAAAGCACACCCACGCCAAGTACACCCGACGCGGGGAGAATCTGGATCAGTACTGGTTTGTGACGTACTAC GCCAACGATCACGAATTCGAGCCAGGCAGCGTGTTCCACGTTAAAAGCCCCAGCATTCACCAGGAAATCTACGGCACACC GGAATATATGGCGGTAATCCAATCAGCGATGCTGAATGGGGAAGCCACGTTGTTCCGGCGTAATTACTACATCAACGGTA GCCATGCGGGGGTGATTGTCTACCTCACCGATCCCATCACCAACAATGCTGACGTCGAGCAATTGAAGAAGTCGCTGAAA GATGCGCGTGGCAATGGGGCATTTAAGAACCTGTTTGTTTACGCGGCAGGCGGGAAGAAAGACGGCTTGCAAATCCTGCC GTTTAGTCAGATTGCGGCCAAAGATGAGTTTACCGGCATCAAGGACGCTACCCGCGACGACATGTTAGCCGCGCACCGTG TACCGCCCAACTTAATGGGGATTATGCCGAACAATGCAGGGGGATTTGGTGACGTAGAGAAGGCCGCGAAGGTATTCGCC ATCAACGAACTCATGCCGATAATGGAAAGCCTGAAAGAGCTTAACGACTGGCTGGGGATCGAGGTACTTCGGTTCAAGCC TTATGCCCTGGCCGAAGGTGCAATGTAA Protein sequence : MSRKKQHPRTANLRAPAAQTPVTGELIQQPIESLQSFSFGDAQPIMDRRDLLDCMECARNGRWYEPPISTYGLARMFDVA VHHQSPILFKRNVIMSCYEPHPLLSRQDASAFVLDWLVFGNAYLELRKNRFGQPLKLKHTHAKYTRRGENLDQYWFVTYY ANDHEFEPGSVFHVKSPSIHQEIYGTPEYMAVIQSAMLNGEATLFRRNYYINGSHAGVIVYLTDPITNNADVEQLKKSLK DARGNGAFKNLFVYAAGGKKDGLQILPFSQIAAKDEFTGIKDATRDDMLAAHRVPPNLMGIMPNNAGGFGDVEKAAKVFA INELMPIMESLKELNDWLGIEVLRFKPYALAEGAM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 5e-98 | 56 |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 5e-98 | 56 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 4e-81 | 47 |
