Gene Information

Name : PC1_2638 (PC1_2638)
Accession : YP_003018204.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : replication protein A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2996913 - 2999423 bp
Length : 2511 bp
Strand : +
Note : PFAM: replication gene A; KEGG: eca:ECA2627 putative phage replication protein A

DNA sequence :
ATGGCTGAACAATGGGCTTATCCGTGGAATGCGCCACGTCCAGCGATCTCCATACCACAGGGGATCGCTGACTCCTTTTC
TCCCTTTGCTACAAATACCACCGAGCCACACCCAGCAGTCGAGCAACACCTTAAGCGGCTGGTATCGCGCGCTGCTTTCT
CCGATCTGGATTTTGATCAGGCCGTCGCGAGGCTGGACTATTTCGAGCCTAACGCAACGTTACTGACGATGCGCCGTCAG
TTCGCTGAGGCTGAGCGGGACGAGCATCAAGCAACATTGCAGAACTGGATGGAAACACCGGAAGGTGTCGAATGCCGCTT
GCTTGAACAGCCGTTTTTTATCCGCGATACCTACAGGAAAAAAATCGAATGGCTGCGCGAGAACCGCGAGTCGCGACACG
TCAGCGCCTTTTTCATGGGAACCGTGAAAAAAGCCCTGCTGCGTCTGGATGCCGTGCGCGCCAAGCAAGGTGTGCGTAAT
GGTTTTACGTCAGAGCTTGCCAGCTACTGGCGCGCACGGTGGATGCATCTTGCCGAGTTTACGAAACATGAGGCGATTAA
CGCCGGTCATGCTATCGCAGCCAGCATCGCGGAAATGTTTGAAACCGAATGCGGCAACACTTTGCCCGCAGATATGACGA
ATGACGATATTCAGGCGCTTTTCTGGCATCTGGGGCGTGAAATGCTGGCGCTACGGGTTACGCCGCCGTGTTGGGGCGTA
ATCATCGGCGATAACGAGTCACGAAACCGCATTTATTCCGCCATTCTGCGTATCACCAATGCTGATTGGTGGGGGCGTAA
GTTATGGCGTTTACGCTGCGAGTGGCGAGAAAACCAGTTCCGCGCCATCGGTGTGATCCACAAGAAACGTATGCAGTATG
TCAGTATCGATGCGCTGAACCAGTGGCAGGAGCAACGCCGCAAAAACCGAGAATTCTTTAAAGCGCATGAGTTAGTCGAT
GAGGACGGTAACGTAGCGTCGCTGGAAAACATGGTGTACGCCAGCGTTAGTAATCCGGTTATTCGCCGTCACGAACTGAT
GACGCGTATGGCTGGCGTTGAAATGGTTGCCATATCACGTAGCGATGAGGGTGTTTTTCTTACCATCACTTGTCCGTCTC
GTTATCACGCCACCATTCAGAGCGGTCATCAAAATCCCAAGTGGGATACATCATCACCTCGGCAGGGGCAGCGCTATTTG
TGTAAGACGTGGGCTAAAGCCATGTCGAAACTGAACCGACGCGGCCTGCGTCCGTATGGTTTTCGCGTTGCAGAACCGCA
TCACGACGCTACGCCGCACTGGCATGTATTGCTATTCATGCCGCCAGAAGACCGGAAAGAAATCACTGAAATTCTGCGTG
AATACTTCATCGCTGTAGACCGCGCTGAGCTGGGGCGTAATACCGGCGCGCGCTTTAAAGCGAAGCGTCTTGATCCTAAG
AAGGGTAGCGCCACTGCCTACGTTGCGAAATATATCAGTAAAAACATCGACGGCTACGCACTTGACGGTGAGCGTGATAA
CGAAACCGGAAAGCCTCTGCGTGAAACCGCAAAGTTTGCGATGGCCTGGGCGTCTCAACATAACATCCGGCAGTTTCAGC
CGTTCGGCCTGCCGCCAGTCACAGTCTGGCGCGAGCTGCGCAAACTAGCGAACCAGCTTATCGCGGTACAGAAAGAAGCC
GGAACATTCAAACGTGGCACGGCACAGCTTGCTGATCCTGCAATGGATGCCGTGCTGGCCTCTGCGGACGCAGGCTGTTT
CGCTACTTACATCGAAAAGCAAGGCGGCGTGCTGATCCCACGCGAGTTATACACAGTGCGCATCGCGTATGAGGAAGCCG
ACGAGCAAAACGACTACGGCGAGACACCAGAAAAAATCTTTGGTGTTTTCTCCCCGCGTTTGGGTGAGCTATCGCGCATC
TGTACCCGTCTCGTTAAGTGGAAAATCCGCAAAAAACAGGCAGCAGACGCAGGCGCTAGTGATAGCGCTGGACGTGATTT
GGCTGTTACGTCGCCCGCCGGCGACGCTTGGAGTTCTGTCAATAACTCTACGGGCGACGAAAAAGTAAGCATTTCCGAAC
CGGCCGATAGAGAGATTGGCAGTACGTCAGAGCCAGAAATTACCGACTTTGAGCACATGACCGACGCGGAACTGCGTGGA
TTGCTCAATCGACTTCGATCACAGCCGCCGGATCGGCGACATAGCGAACACTCGTCCACAACTCAGCCCCATGAAACGAC
TGAAAAACAGACTGTTAGTAAGCGGTCGGACGACTGGCGCGCCAGAATTGCAGATTTCGCCCGTTCGTTGGGCTGGGATA
TCAGCGCCGGTGAGGTGCGGCGGCTGGAAACAGGAAATGCGATCGCGCTCGCTGGCTATGCCTACGTTGCTAACGGTGAC
GGTTGTCTGTATCGCGCGCCGACGAAAAAGCAAAAGGACGCGGAATATCAGGATAGAGCGGCGGCACTGCTGCAACGCAT
TGCAGTGTTACGTGGGGGTGGATTCCAATAA

Protein sequence :
MAEQWAYPWNAPRPAISIPQGIADSFSPFATNTTEPHPAVEQHLKRLVSRAAFSDLDFDQAVARLDYFEPNATLLTMRRQ
FAEAERDEHQATLQNWMETPEGVECRLLEQPFFIRDTYRKKIEWLRENRESRHVSAFFMGTVKKALLRLDAVRAKQGVRN
GFTSELASYWRARWMHLAEFTKHEAINAGHAIAASIAEMFETECGNTLPADMTNDDIQALFWHLGREMLALRVTPPCWGV
IIGDNESRNRIYSAILRITNADWWGRKLWRLRCEWRENQFRAIGVIHKKRMQYVSIDALNQWQEQRRKNREFFKAHELVD
EDGNVASLENMVYASVSNPVIRRHELMTRMAGVEMVAISRSDEGVFLTITCPSRYHATIQSGHQNPKWDTSSPRQGQRYL
CKTWAKAMSKLNRRGLRPYGFRVAEPHHDATPHWHVLLFMPPEDRKEITEILREYFIAVDRAELGRNTGARFKAKRLDPK
KGSATAYVAKYISKNIDGYALDGERDNETGKPLRETAKFAMAWASQHNIRQFQPFGLPPVTVWRELRKLANQLIAVQKEA
GTFKRGTAQLADPAMDAVLASADAGCFATYIEKQGGVLIPRELYTVRIAYEEADEQNDYGETPEKIFGVFSPRLGELSRI
CTRLVKWKIRKKQAADAGASDSAGRDLAVTSPAGDAWSSVNNSTGDEKVSISEPADREIGSTSEPEITDFEHMTDAELRG
LLNRLRSQPPDRRHSEHSSTTQPHETTEKQTVSKRSDDWRARIADFARSLGWDISAGEVRRLETGNAIALAGYAYVANGD
GCLYRAPTKKQKDAEYQDRAAALLQRIAVLRGGGFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4328 NP_807922.1 hypothetical protein Not tested SPI-7 Protein 6e-99 42
STY4635 NP_458715.1 conserved hypothetical protein Not tested SPI-7 Protein 1e-98 42