Gene Information

Name : PC1_2568 (PC1_2568)
Accession : YP_003018135.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : DegT/DnrJ/EryC1/StrS aminotransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0399
EC number : -
Position : 2934672 - 2935781 bp
Length : 1110 bp
Strand : -
Note : PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: eca:ECA1733 nucleotide sugar transaminase

DNA sequence :
ATGAAAAAACCAGTGTATGTAACAAGCCCGTTATTACCGCCTTTGGATGAGTTTACTCCTTATCTTGAAGAAATATGGGA
AAATAAGTGGCTAACTAATAATGGGACATTCCATCAGCGGTTGGAGCAAGCTCTGGCTGATTATCTTGGCGTTCCATACC
TTAGTTTATTTTCCAATGGCACACTGGCTTTATTAACTGCTTTGCAAGCGTTACGTATCACTGGCGAGGTCATTACTACT
CCTTACTCATTTGTGGCAACATCGCATACATTACTGTGGAATGGGTTAAAACCCGTCTTTGTTGATATTGATCCAGTAAC
ATGTAATCTTGATCCTTCTAAATTAGAGCAGGCTATTACGCCAGCAACGTCTGCAATTTTACCCGTGCATTGTTATGGAC
TACCTGCAGATGTTGACCGTATTCAAAATATAGCTGATATATATGGCCTAAAAGTGATTTATGACGCGGCTCATGCTTTT
GGTGTTAAGAGGAATGATGTCAGCATATTAAATCATGGCGATCTTTCGATTCTCAGTTTTCATGCGACGAAAGTTTTTAG
CACTATCGAAGGTGGTGCGATTATTTCTCAAGATGAGAAAATGAAAAAGAGAATTGATTATCTTAAGAATTTTGGCTTCG
TTGATGAAGTAACCGTTGTTGCTCCTGGTATTAATGCAAAAATGAATGAGGTTCAGGCCGCATTCGGATTGCTTCAATTA
AAATATATTGATTCAGCATTGGAGCAGCGTAAGAGTATTTATCTAAGATATTGTGAGCTTTTAAAAAACATTGCGGGAAT
TAATGTTGTGAACATTCCTGAGAATGTGACCTGGAATTATGCTTATTTTCCTATTTTCTTCTCTGATGACTTCCCTAAAA
AAAGAGATGAAGTTTACAATATGATGAGAGAAAAAAATATATATGCTCGCCGATATTTTTACCCTCTGATCAGTACTTTC
CCAATGTATCGAGGGTTGGACTCAGCTAAAGAAGGTGGCCTGCCAACGGCAACGCACATTGCTGACAATGTGCTCTGTCT
TCCTATTTATCCTGATTTGTCAGATGAAAGTATATTGGATGTTGTTAGGTGTATTTCTGATTGTGCGTAA

Protein sequence :
MKKPVYVTSPLLPPLDEFTPYLEEIWENKWLTNNGTFHQRLEQALADYLGVPYLSLFSNGTLALLTALQALRITGEVITT
PYSFVATSHTLLWNGLKPVFVDIDPVTCNLDPSKLEQAITPATSAILPVHCYGLPADVDRIQNIADIYGLKVIYDAAHAF
GVKRNDVSILNHGDLSILSFHATKVFSTIEGGAIISQDEKMKKRIDYLKNFGFVDEVTVVAPGINAKMNEVQAAFGLLQL
KYIDSALEQRKSIYLRYCELLKNIAGINVVNIPENVTWNYAYFPIFFSDDFPKKRDEVYNMMREKNIYARRYFYPLISTF
PMYRGLDSAKEGGLPTATHIADNVLCLPIYPDLSDESILDVVRCISDCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK15326.1 unknown Not tested Not named Protein 2e-106 65