|
Name : PC1_2555 (PC1_2555) Accession : YP_003018122.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2920392 - 2921864 bp Length : 1473 bp Strand : - Note : TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: eca:ECA1745 betaine aldehyde dehydrogenase DNA sequence : ATGTCTCGCTACGGTTTACAACAGCTTTATATCAACGGCGCTTATGTCGATAGCACGGGTGACGATACGTTTGATGCAGT AAATCCCGCGAATGGCGAGATCATCGCTCAGCTCCAGTCGGCCACTGTTGCTGATGTTGATCGTGCGGTCATTGCCGCCG CCGCAGGGCAGAAGATATGGGCGGCGATGACTGCGATGGAGCGCTCGCGTATTTTACGCCGTGCCGTGGATATCCTGCGT GAGCGTAACGATGAACTCGCGTTACTTGAAACGCACGATACTGGCAAACCGCTCTCAGAAACGCGCACCGTCGATATCGT GACTGGTGCGGATGTTCTGGAATATTACGCGGGGTTGATTCCCATGCTCGAAGGGCAGCAGATCCCCCTGCGTGATACCT CGTTCGCCTATACCCGCCGGGAACCGCTTGGTGTGGTCGCCGGCATCGGTGCCTGGAACTATCCGATTCAGATCGCATTG TGGAAATCGGCCCCTGCACTGGCGGCGGGCAATGCAATGATCTTCAAACCCAGCGAAGTCACGTCGCTTACCGCGCTGAA GCTGGCAGAAGTCTACACCGAGGCTGGATTACCGGCTGGCGTATTCAACGTGCTGACGGGAACGGGACAATCCGTTGGTC AGGCGCTGACCACGCATCCTGGGATTGCCAAAGTCTCTTTCACGGGAGGGATTGCCAGCGGGAAAACGGTAATGGCCAAT GCCGCAGGCTCGACGCTGAAAGACGTTACGATGGAGCTGGGTGGGAAATCGCCGCTGATCGTTTTTGAGGATGCCGATCT GGATAAGGCGGCGGATATCGCCATGATGGCGAACTTTTTCAGCTCAGGGCAGGTGTGTACCAACGGTACACGCGTCTTCG TTCCGCAGGCATTGCAGACGCAGTTTGAGGAAAAAATTCTGGCGCGCGTTCAGCGCATTCGTATCGGTAACCCGACTGAT GAAGCCGTAAATTTTGGTCCACTGGTTAGCTTCCCGCACAGAGAATCTGTACTGCGCTACATCGAAAGCGGAAAGCGCGA AGGTGCTCGCGTGCTGGTGGGCGGCGAACCGATGACTGACGAGAAATATGCACAAGGTGCATTCGTTGCCCCTACGGTGT TCACGGATTGTCGGGACGATATGAAGATTGTGCGGGAAGAAATCTTTGGCCCGGTCATGAGTATTCTGACGTATCAAAAT GAGGATGAGGTTATCCGCCGTGCCAATGATAGCGAATATGGGCTGGCGGCTGGTGTTGTGACCGGAGATTTGAATCGGGC ACATCGGGTTATCCATCAGCTTGAGGCGGGGATTTGCTGGATCAACACCTGGGGCGAATCTCCGGCTGAAATGCCTGTGG GCGGCTACAAACATTCGGGTGTTGGCCGTGAAAACGGCATAACAACACTGGAACACTATACGCAAATTAAATCTGTACAG GTTGAACTGGGTGAATTCCGCTCGGTATTTTAA Protein sequence : MSRYGLQQLYINGAYVDSTGDDTFDAVNPANGEIIAQLQSATVADVDRAVIAAAAGQKIWAAMTAMERSRILRRAVDILR ERNDELALLETHDTGKPLSETRTVDIVTGADVLEYYAGLIPMLEGQQIPLRDTSFAYTRREPLGVVAGIGAWNYPIQIAL WKSAPALAAGNAMIFKPSEVTSLTALKLAEVYTEAGLPAGVFNVLTGTGQSVGQALTTHPGIAKVSFTGGIASGKTVMAN AAGSTLKDVTMELGGKSPLIVFEDADLDKAADIAMMANFFSSGQVCTNGTRVFVPQALQTQFEEKILARVQRIRIGNPTD EAVNFGPLVSFPHRESVLRYIESGKREGARVLVGGEPMTDEKYAQGAFVAPTVFTDCRDDMKIVREEIFGPVMSILTYQN EDEVIRRANDSEYGLAAGVVTGDLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGVGRENGITTLEHYTQIKSVQ VELGEFRSVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-67 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_2555 | YP_003018122.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 5e-68 | 42 |
