Gene Information

Name : PC1_2406 (PC1_2406)
Accession : YP_003017973.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2766955 - 2767587 bp
Length : 633 bp
Strand : -
Note : PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: eca:ECA1901 transcriptional regulator NarP

DNA sequence :
ATGTCAGAAAAACCATCTTATCGTGTGTTGATCGTCGACGATCATCCGCTTATGCGCCGGGGAATCCGTCAGCTACTGGC
GACCGATGCCATCTTTGACGTGATAGGGGAAGCCAGTAACGGCATGGAGGCGCTGAGCCTCGCGAACCGGGATTCTCCCG
ATATCATCTTGCTCGATCTCAACATGAAAGGATTGAGCGGGCTGGATACGCTTCACGCGCTGCGGCGCGATGGGATCTGT
GCCCGTGTGATTGTGCTGACGGTCTCCGATGCGCCCAGCGATATTTATGCGCTGATGGACGCGGGGGCTGATGGCTATCT
GCTTAAGGACAGCGCCCCAGAACACTTACTGGATGCCATTCGCAGCAGTGATGCTTTCAGCGATCAAGTCAGGGACGTGC
TACGCCACCGCATCGCCATACAGGAAACACCGTCGCCTTTTACCGTATTGACGGAGCGCGAACTGGATGTGCTGCAGGAA
GTGGCGTCAGGATTATCCAACAAGCAAATTGCCGCAGTGTTGTATATCTCAGAAGAGACGGTAAAAGTGCATATCCGCAA
CATGCTGCGCAAACTCAACGTACGCTCCCGCGTCGCGGCTACGGTGCTGTATCTGGAAACGCGCGGCCAGTGA

Protein sequence :
MSEKPSYRVLIVDDHPLMRRGIRQLLATDAIFDVIGEASNGMEALSLANRDSPDIILLDLNMKGLSGLDTLHALRRDGIC
ARVIVLTVSDAPSDIYALMDAGADGYLLKDSAPEHLLDAIRSSDAFSDQVRDVLRHRIAIQETPSPFTVLTERELDVLQE
VASGLSNKQIAAVLYISEETVKVHIRNMLRKLNVRSRVAATVLYLETRGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
narP YP_217238.1 transcriptional regulator NarP Not tested SPI-12 Protein 5e-67 69