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Name : PC1_2328 (PC1_2328) Accession : YP_003017896.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : polypeptide-transport-associated domain-containing protein ShlB-type Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2831 EC number : - Position : 2672334 - 2674076 bp Length : 1743 bp Strand : + Note : PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: eca:ECA0391 putative activator or transporter protein of haemolysin-like protein DNA sequence : ATGCTACGGAATGCGTCATTCACTGACGGGTATCAACCTGCGCGTCTCAGCCCGCTTGCGCTATTTATTTTATTGACTAC CTCAGCAAGCAGCTGGGCGGCAGATAATAATCTGACGCCTCTTGCCGCACCGGCTCGGGTGGATGAACAGCTAAATATCA ACCAGCAGGATCGCCAGCGTGCGATGCAGCAGCAATTAGCGCCGCAAACGCCCGATGTGCGTTTGCAGCCACCTTCCTCA TTCTTTACTACGTTGCAATTTCCGCAGGAACAACAGTGCTTTACGCTGTATCACATCATACTGACCGGTAAAGAAGACTT CCCCTCCTGGCTGCGTATGCCGCTGCAACAGCTGGCCGATCAGGGTAAAGGTCAGTGCCTGGGCGCTCAGGGTGTCAACC TGCTGATGAGCGCACTGCAAAACCGTCTGATCGACCATGGCTATGTCACCGCACGCGTAATGGCACCGCCGCAAAACCTG AAAACCGGCACCCTGCATATCACCCTGATTCCGGGCAAAACGCGCCAGATAAAACGGACCAAAGAGAGCGATCGCTACGT GAGTCTCTGGAGCGCCCTGCCGGCGCGTGAAGGCGAACTGCTGGATTTGCGTGATATTGAGCAGGGACTGGAAAACCTGC AGCGCGTGCCCACCGTACAGGCAGAGATGGCGATTGTACCGGGCGAACAGCCCGGCGAAAGCGACATTGACGTCACCTGG AAACAGGAAAAAATGTGGCGTCTCGGCGCGACGCTCGATGACTCTGGCACCGAAACCACCGGTCGTTATCAGGGCGGCCT GACGCTGTATATCGATAACCCCTTCGCACTCAGCGACCTGTTCTACATTTCCGGCAACCATGACCTTGAATCCGGCAGCG AAAAAGGCAGCAAGAACTATATGCTGCACTATTCCGTACCGTTCGGTTACTGGATGGCGGGCGTCACCGCCAGCGGCTAC GACTACAACCAGAATGTGGCGGGCGCGTATGAAGACTACAACTACAGCGGCAACAGCAAAAACCTTAACTTCCAATTGAG CCGTGTGCTGTACCGCAGCGGCAGTCAGAAAACCTCAATGAGCTATGAAATTCTGACGCGCGAATCGCAGAACTTCGTCA ACGATACCGAAGTGGATGTGCAGCGACGTAAAACCAGCGCCTGGCGTCTGGGCCTCCAGCATCGCCACTACTTCGGTGCC ACCACTCTTGATGCCGCCGTGAGCTACCAGCGCGGCACCCGCTGGTTCGGCGCTATTCCGGCGCAGGAAGAGTATTTCGA TGAAGGCACCGCGCTGGCGAAAATTATCCAGTTGAATGCACAACTCGATGTGCCTTTTACGCTGGGCAATCAGACCTTCC GCTACAACGTGCAGTATCTGCGCCAGATCAACCATACCAAACTGACGCCACAGGATCAGCTGTCGATTGGTAACCGCTGG ACCGTGCGCGGCTTTGATGGTGAACGCACCCTGACGGCCGACAACGGCTGGTTCGTGCGCAACGATCTGGCCTGGCGCAC CCCGCTTCCTAACCAGGAAATGTATCTCGGCGCTGACTACGGCGAAGTAGACGGCACGCGTGATTATCTCGCCGGGAAAC ATCTGGCGGGCGGCGTGCTTGGTCTGCGCGGTAACGCCTTTAACACCGGCTACGACCTGTTTGTCGGTGTGCCGTTCTCC AAACCGGAAGGTTTCCACACCAGTCCGGTCACCCTCGGTTTCAACCTCAGCTGGCAGTACTAA Protein sequence : MLRNASFTDGYQPARLSPLALFILLTTSASSWAADNNLTPLAAPARVDEQLNINQQDRQRAMQQQLAPQTPDVRLQPPSS FFTTLQFPQEQQCFTLYHIILTGKEDFPSWLRMPLQQLADQGKGQCLGAQGVNLLMSALQNRLIDHGYVTARVMAPPQNL KTGTLHITLIPGKTRQIKRTKESDRYVSLWSALPAREGELLDLRDIEQGLENLQRVPTVQAEMAIVPGEQPGESDIDVTW KQEKMWRLGATLDDSGTETTGRYQGGLTLYIDNPFALSDLFYISGNHDLESGSEKGSKNYMLHYSVPFGYWMAGVTASGY DYNQNVAGAYEDYNYSGNSKNLNFQLSRVLYRSGSQKTSMSYEILTRESQNFVNDTEVDVQRRKTSAWRLGLQHRHYFGA TTLDAAVSYQRGTRWFGAIPAQEEYFDEGTALAKIIQLNAQLDVPFTLGNQTFRYNVQYLRQINHTKLTPQDQLSIGNRW TVRGFDGERTLTADNGWFVRNDLAWRTPLPNQEMYLGADYGEVDGTRDYLAGKHLAGGVLGLRGNAFNTGYDLFVGVPFS KPEGFHTSPVTLGFNLSWQY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 2e-165 | 63 |
