Gene Information

Name : PC1_2321 (PC1_2321)
Accession : YP_003017889.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : Redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2662363 - 2662866 bp
Length : 504 bp
Strand : +
Note : PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: eca:ECA1990 thiol peroxidase

DNA sequence : 
ATGTCACAGAACGTACATTTTCAAGGCAATCCTGTGCCAGTATCAGGGTCATTCCCAGCCAAAGGAAGCAAAGCCCCGGC
ATTTACCCTGGTCGCTAAAGATTTGTCAGATACCCCACTCAGCAACTATGCTGGCAAGCGCAAAATCCTGAACATTTTCC
CAAGCATCGATACCGGTGTTTGTGCCGCGTCCGTGCGCAAATTCAACCAGCTGGGTTCTGAGCTGGATAACACCGTTGTT
CTGTGTATTTCTTCCGATCTGCCATTCGCTCAGTCTCGTTTTTGCGGCGCGGAAGGTCTGAACAACGTCGTTGTGCTGTC
TACCCTGCGTGGCGGTGAGTTCAAAGAAAATTACGGTGTTGCTATCGCTGATGGCGCGCTGAAAGGCCTGACCGCTCGCG
CGGTTGTTGTACTGGATGAAAACGACAACGTCCTGCATAGCGAGCTGGTGAACGAAATCACCACTGAACCAGACTATGAC
GCCGCACTGGCAGTTCTGAAATAA

Protein sequence : 
MSQNVHFQGNPVPVSGSFPAKGSKAPAFTLVAKDLSDTPLSNYAGKRKILNIFPSIDTGVCAASVRKFNQLGSELDNTVV
LCISSDLPFAQSRFCGAEGLNNVVVLSTLRGGEFKENYGVAIADGALKGLTARAVVVLDENDNVLHSELVNEITTEPDYD
AALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 5e-36 51
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-36 51
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 7e-36 51
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-36 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_2321 YP_003017889.1 Redoxin domain-containing protein VFG0087 Protein 8e-37 51