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Name : PC1_2281 (PC1_2281) Accession : YP_003017855.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : fimbrial biogenesis outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 2621500 - 2624130 bp Length : 2631 bp Strand : - Note : PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: ent:Ent638_1071 fimbrial biogenesis outer membrane usher protein DNA sequence : ATGCGTTCAGAACCGACGAAACAGCAGCGTTCCGCCGCCCCTTATCGCGCAGTCCGTCCATGCCTGCGTTGGTATCCGGC CGTGATGCTGTACATGGCATTCCCACTCGCTGGTGATGCTGAGACTTTCTTTAATCCGACATTTTTATCGGACGATCCTT CGGCTATTGCCGATCTCTCTCGCTTTGATAAAGGTGAAGGGCAACCACCGGGTATCTATCGGGTAGAGATTTATGTTAAC GCAGAATATGCGTTTTCTCGTGATGTTGCGTTTCAACTACGCACGCCATCCGATAAACCGTCCAGTGATGATACAGGTCT TGAGCCTTGCCTGCCGATAGCGTTGCTGGAACAACTTAATGTCAATCTACAGTCGTTTCCTTCTTTACGTGATGAACCGG CTTCCGCATGCATCAACGTGCCTCAGGCGATTCCCGATGCCAGCGTGCGCTTTGACTTTGAACTCCAGAGATTGAACATC AGCTTGCCGCAAATTGCGCTAAAAAATGCCGGGCGAGGATATATTCCGCCGGAGGAGTGGGATGAGGGCATCACGTCAGC GTTATTTAATTACCAGTTCACGGGCAGTAATACGCACGGCGATGCTCGCAGTGACAGCTATTTTCTTAATCTTGATAGCG GAGTGAACTGGAACGGCTGGCGGTTGCGCGATTACTCTACCTGGCGTTATTCCCGCTATGCAAACCAGCGCTATAACGAA TTCCAGCACGTCAGTACTTATTTACAGCGTGCCATCATTCCCTGGCGCAGCGAATTGACTCTCGGCGACAGCAATACAGT AGGCGAGGTTTTCGACAGTTTGGGATTTCGCGGCGTACAGATTGCGTCCGATGACGCGATGCTGCCGGACAGCCTTAGAG GGTTTGCACCAACGATCAGGGGGATTGCCAAAAGCAACGCCCGCGTCACCATTCGACAAAATGGCTATGTGATTTATCAG GCTTATGTTGCGCCTGGTGCGTTCGAAATTACCGACCTTTACCCAACGTCATCCAGCGGCGATTTACAGGTAACCATTAC TGAGAGCGATAACTCGACGAACAGCTTTTTCGTGCCGTATTCCGCCGTGCCACTGCTCCAGCGTGAGAACCGGATGAAAT ATTCCGCGATGGTCGGTAAATACCGTAGCAATAATCCACAACAGGATCAGCCCTTGTTTGGTCAGGGGACGCTGATCTGG GGGCGTTCGGCTGGGGTGACGTTGTATGGCGGCACACAACTGGCTGAAGATTATCAGGCACTGACGCTAGGTTCAGGGAA AAACCTCGGCGACTGGGGCGCATTTTCAGCCGATCTCACGCAGGCTTATAGCACGTTGTCGGATGGTAGCGATCATAAAG GGCAGTCACTGCGTTTCCTGTATGCCAAATCGCTGAATGATCTGGGGACGAATTTTCAGATCCTGGGTTATCGCTATTCA ACCAAAGGTTTTTTTACGCTGGATGAAGCCAGCTATAAAAACATGAGTGGTTATACGGTCGACTTTACCGATGTTCAACC TGTGGTTCGCGACTACTACAACCTGAATAACGCGAAAAAAAGCAGGATGCAGATGAATATCACCCAGCAGTTAGGGAAGG GAATGGGGTCGTTATTTTTAACGGGAAGCCGACAGGATTATTGGCATACCAAGGGTACAAACGATCTGTTGCAGGTCGGC TACAGCAATGTGTACCGCGGTGTGAGTTATAACCTGAGTTACAGCTATAACAAGAATCAAGGGCTGGAAGAACGGAACCA GCTGTTTGCTTTTAACCTCTCTGTTCCACTGAGTCAGTGGCTCAGTGGACATCGTGAAGGGATTAACCTGCGGCGTTCAC AGAATACGGCTTACGCTTCCTACAACATGACGTCGGACAATCAAGGGCGCACGTTACAGCAGGTAGGGCTCAGTGGCACG ATGCTGTCGGATGGCAATCTCAACTACAACGTCTCCCAAGGGTATGGTAATCGCGGCATTGGGAATAGTGGGAACGCGGG GCTTGGCTATCAGGGCACCTATGGCAACAGCAACGCCAACTACAACTATACGCGCAACACTCGTCAGCTTAACTATGGGG TGAGCGGCGGAGTGGTGGCGCATGCCGATGGAGTCACGTTTAGTCAGCCGCTGGGCGATACCAACGTATTGATTAAGGTT CCCGGTACCAGCCGTGTCAAAGTGGAGAATACCACCGGTATCCAGACTGACTGGCGTGGCTATGCCGTTATTCCTTACGC CAGCGTTTATCGCAATAACCGCATTGCCCTCGACGTCAATTCGTTAAATCAAAACACAGAGGTCAACAATACTGTCGCCA ACCTTGTACCGACGCGAGGGGCGATGGTTCGTGCCAGCTTTACCGCCTATCAAGGCGGGCGTGCGCTAATTTCGCTACAG CAGCGTAATGGCCGACCGGTTCCTTTTGGTGCGCTTGTCTCCCGTGTAGACAGCGATAGCACCGGTATTGTTGGTGACGA TGGGCAGGTCTTCCTGTCTGGGCTAACCCCTGAAGGCGAGCTGAAGGTTGCATGGGGAAGTGGTTCACAGCAGCAATGTA CGCTTCGCTACGCTCTTCCAGACGGCAGTGAAAACCAACCGGTATCCTATACGAAGGCGGTATGTCAATGA Protein sequence : MRSEPTKQQRSAAPYRAVRPCLRWYPAVMLYMAFPLAGDAETFFNPTFLSDDPSAIADLSRFDKGEGQPPGIYRVEIYVN AEYAFSRDVAFQLRTPSDKPSSDDTGLEPCLPIALLEQLNVNLQSFPSLRDEPASACINVPQAIPDASVRFDFELQRLNI SLPQIALKNAGRGYIPPEEWDEGITSALFNYQFTGSNTHGDARSDSYFLNLDSGVNWNGWRLRDYSTWRYSRYANQRYNE FQHVSTYLQRAIIPWRSELTLGDSNTVGEVFDSLGFRGVQIASDDAMLPDSLRGFAPTIRGIAKSNARVTIRQNGYVIYQ AYVAPGAFEITDLYPTSSSGDLQVTITESDNSTNSFFVPYSAVPLLQRENRMKYSAMVGKYRSNNPQQDQPLFGQGTLIW GRSAGVTLYGGTQLAEDYQALTLGSGKNLGDWGAFSADLTQAYSTLSDGSDHKGQSLRFLYAKSLNDLGTNFQILGYRYS TKGFFTLDEASYKNMSGYTVDFTDVQPVVRDYYNLNNAKKSRMQMNITQQLGKGMGSLFLTGSRQDYWHTKGTNDLLQVG YSNVYRGVSYNLSYSYNKNQGLEERNQLFAFNLSVPLSQWLSGHREGINLRRSQNTAYASYNMTSDNQGRTLQQVGLSGT MLSDGNLNYNVSQGYGNRGIGNSGNAGLGYQGTYGNSNANYNYTRNTRQLNYGVSGGVVAHADGVTFSQPLGDTNVLIKV PGTSRVKVENTTGIQTDWRGYAVIPYASVYRNNRIALDVNSLNQNTEVNNTVANLVPTRGAMVRASFTAYQGGRALISLQ QRNGRPVPFGALVSRVDSDSTGIVGDDGQVFLSGLTPEGELKVAWGSGSQQQCTLRYALPDGSENQPVSYTKAVCQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 49 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_2281 | YP_003017855.1 | fimbrial biogenesis outer membrane usher protein | VFG0446 | Protein | 0.0 | 52 |
| PC1_2281 | YP_003017855.1 | fimbrial biogenesis outer membrane usher protein | VFG0876 | Protein | 0.0 | 49 |
| PC1_2281 | YP_003017855.1 | fimbrial biogenesis outer membrane usher protein | VFG1645 | Protein | 0.0 | 47 |
| PC1_2281 | YP_003017855.1 | fimbrial biogenesis outer membrane usher protein | VFG0912 | Protein | 0.0 | 47 |
| PC1_2281 | YP_003017855.1 | fimbrial biogenesis outer membrane usher protein | VFG0454 | Protein | 4e-170 | 45 |
