Gene Information

Name : PC1_0023 (PC1_0023)
Accession : YP_003015622.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 26163 - 26963 bp
Length : 801 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4413 aliphatic sulfonates transport ATP-binding subunit

DNA sequence :
ATGACCGCTTTTACCGATTCTGCAACACGCGCGCATTCGCCGTCGCCACTCACCAAGGGGACGCCGCTGGCGCTGGATGC
CATTACCAAACATTACGGCCACCGCACCGTGCTGAATGACGTGCAGTTGCGTATTCCTTCCGGGCAGTTTGTTGCCATTG
TCGGCCGCAGCGGCTGTGGCAAGAGCACCCTACTGCGTCTGCTTGCGGGGCTGGAAGCCGCCAGCAGCGGAGAACTGTTG
ACCGGCACCGCACCGCTCAGTAGTGCGAAAGACGACACGCGGCTGATGTTTCAGGAAGCGCGCCTGCTGCCGTGGAAAAA
GGTGATCGATAATGTCGGGCTGGGACTGCGAGGCAACTGGCGTGAGAAAGCGCAGGAGGCGCTGGCCTCCGTCGGGCTGG
CAGATCGCGCCAGCGACTGGCCAGCAGCGCTATCCGGCGGTCAAAAACAACGCGTCGCGCTGGCACGCGCGCTCATTCAC
CATCCGCGTCTGCTGCTGTTGGATGAACCGCTGGGTGCGCTGGATGCCTTAACCCGCATCGAAATGCAAAGCCTGATCGA
AAATCTGTGGCTCCAACATGGCTTCACCGTACTGCTGGTGACGCACGATGTCTCCGAAGCCATTGCGCTGGCTGACAGGG
TGATTCTGATTGAAGAAGGGCGCGTGGGGCTGGATATTACAGTCGATTTACCCCGGCCGCGGCGTCGCGGATCGGCAAAG
CTGGCGGAACTGGAAGCCCGCGTGCTGGAACGCGTGCTGGCTCCTGCTTCATCTCCTCTGCCCCAGCAGGCGGTAATATA
A

Protein sequence :
MTAFTDSATRAHSPSPLTKGTPLALDAITKHYGHRTVLNDVQLRIPSGQFVAIVGRSGCGKSTLLRLLAGLEAASSGELL
TGTAPLSSAKDDTRLMFQEARLLPWKKVIDNVGLGLRGNWREKAQEALASVGLADRASDWPAALSGGQKQRVALARALIH
HPRLLLLDEPLGALDALTRIEMQSLIENLWLQHGFTVLLVTHDVSEAIALADRVILIEEGRVGLDITVDLPRPRRRGSAK
LAELEARVLERVLAPASSPLPQQAVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-39 46