Gene Information

Name : PC1_2135 (PC1_2135)
Accession : YP_003017710.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein P47K
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 2440758 - 2441981 bp
Length : 1224 bp
Strand : -
Note : PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: cko:CKO_00925 hypothetical protein

DNA sequence :
ATGGCTGACGTAGTAGCTCGACAGAGCGCAGATGCAAGATTACCTGTGACCGTACTATCTGGCTTTCTCGGTGCGGGAAA
GACCACGTTACTTAACCATATTCTGAATAATCGCGCTGGTCTCCGCGTCGCGGTGATCGTCAACGACATGTCAGAAGTAA
ATATTGATGCTGCACTGGTGAGGGAGGGGGGCGCTGAGCTTTCACGGACGGACGAAAAGTTGGTGGAGATGAGTAACGGC
TGTATCTGTTGTACGTTGCGTGAAGATCTACTGATCGAGGTTAATCGGCTGGCGAAAGAAGGGCGTTTTGATCAGTTGGT
CATTGAATCAACCGGTATCGCGGAGCCGCTTCCAGTCGCAGAAACGTTCACGTTTGCGGGTGATGATGGAGAAAGCCTTT
CTGAAGTGGCGCGGCTGGATACGATGGTGACCGTTGTTGACGGGTATAATTTCTTAAAAGATTACGCTTCGGTGGACAGC
ATTCACTCTCGTGGAGAATCGTTAGGAGAAGGTGACGAGCGCAACGTGGTGGATCTGCTGATCGATCAGATCGAGTTCTG
CAATGTGGTTATTCTCAACAAAATCGACCTTATTGATGTGGCGCAACAGCAGAAGCTGGTTGCGATTATCCGTTCACTGA
ATCCGGGCGCGAAAATACTTCATGCACAATTCGGAGCTGTGCCGCTGAACGAGGTGCTCAACACAGGATTATTTGATTTC
GACAAAGCGGCGCAGGCCCCCGGATGGTTGAAAGAATTACGTGGTGAACATACGCCTGAAACTGAGGAGTATGGCATCGC
CAGTTTTGTTTTTCGCGCGCGTCGGCCGTTTCATCCTGCCCGCTTCGCACAGGTCATGGAAAATTCGCTCACCGGGGTTG
TCAGATCCAAAGGCTATTTTTGGTTAGCAAGCCGCCCAGAATATGCCGGCTCGTGGTCTCAGGCAGGCGGCGTGGCGCGT
CAGGGGCTGGCTGGTTCATGGTGGGTCAGCGTGCCAAAAGCAAAGTGGCCGACAGATAGTGAATCGCTCGATTACATTCG
TTCCATATGGGTGGATGGCGTGGGTGATGCGCGGCAGGAACTGGTGTTTATCGGTATCGATATTGATGAACTCACGTTGC
GAGCCCGTCTGGAAACCGCGCTGCTGACGGACAAAGAAATGGCAGAAGGTCTGGCGATGTGGTTAGATTATCCGGACCCG
ATAGAGCCCTGGTTTGCGTCATAA

Protein sequence :
MADVVARQSADARLPVTVLSGFLGAGKTTLLNHILNNRAGLRVAVIVNDMSEVNIDAALVREGGAELSRTDEKLVEMSNG
CICCTLREDLLIEVNRLAKEGRFDQLVIESTGIAEPLPVAETFTFAGDDGESLSEVARLDTMVTVVDGYNFLKDYASVDS
IHSRGESLGEGDERNVVDLLIDQIEFCNVVILNKIDLIDVAQQQKLVAIIRSLNPGAKILHAQFGAVPLNEVLNTGLFDF
DKAAQAPGWLKELRGEHTPETEEYGIASFVFRARRPFHPARFAQVMENSLTGVVRSKGYFWLASRPEYAGSWSQAGGVAR
QGLAGSWWVSVPKAKWPTDSESLDYIRSIWVDGVGDARQELVFIGIDIDELTLRARLETALLTDKEMAEGLAMWLDYPDP
IEPWFAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 5e-74 52
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 2e-74 52