Gene Information

Name : PC1_2128 (PC1_2128)
Accession : YP_003017703.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Resistance
Product : sulfatase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 2432265 - 2433914 bp
Length : 1650 bp
Strand : -
Note : PFAM: sulfatase; protein of unknown function DUF1705; KEGG: sml:Smlt2804 putative transmembrane protein

DNA sequence :
GTGTTTCAACGTCTGTCATCCTTGCGGCTCAACCCGGTACAACTGACCTGGGTAGCTGCTCTGTTCTTTACCACCATTGG
CAACGTTGGACTGTGGCAAATGCTATGGTCCAAAGTGGAGATTAACAGCCTGCACAGCTTGCTGTTTTTCATCAGCCTAC
CGGTTTTCTTTTTCTGTCTTATCAACCTGTTGCTTACGCCCGTTCTGGCATTACCTTACGTGCGCAAGCCGCTATTGGCA
CTATTGGTCGTCATCAGCGCCAGCTGCAGTTACTTCATGTTCAACTATAACGTGCTGATCGATCGCAGCATGGTGCAGAA
CGTCTTTGAGACCAATCAGGCAGAGCTCGCCTCGTACTTTTCAATTCCCTTGCTGCTCACCATTCTTGTACTGGGTGTGC
TACCTGCGGCGGTGATGGTTTGTTTACCCACCAAACAGACTGAGCATCCCTTGCAAAACGCGCTATGGTGGCTGGGCAAT
GTACTGGTGACATTCGTCGTGCTGGCTGCGGTGACGATGCTGTTCTACAAGGACTACGCCTCGTTGCTGCGCAACAACCT
GCAAATCAGGGATCAAGTGCTACCCTTCAATTTTGTGCGTAACACCAACGGCTACCTGAAACGCTACCTGAAACGCACGA
CATCTCAGCTGTTGCGAACTGTGGCAGAAGATGCCACGCGCCCTGAGACCAGAGAGCGGCCCAAACTCGTGATTGCCGTG
GTGGGGGAAACCGCACGGGCACAGAACTTCCAGCTTAATGGTTATCCGCGAGCGACCAACCCATCTCTGTCGCAGCGCGA
AAACATCATCAGTTTCAAAAACGTCTCATCCTGTGGCACGGCTACGGCCATTTCACTGCCCTGTATGTTCTCACGTATGA
CACGTACGCAATACGATGAAGTACGTGCAGCGACGGAAGAGAACCTGCTCGATATCCTGCGACGCACCGGTGTGCAAATA
CTTTGGCGAAACAACAATAATGGCGGTTGTAAAGGCGTGTGCGAGCGCGTGCCCACCGATGACATGCCGATACTGAAAAT
TACTGAACAATGCGTCAACAAGGACGGTACCTGTTATGACGACGTACTACTGCACCAACTCAGTTCACGCATTGATGCCA
TGTCGGGCGACGCATTAATCGTGCTGCACCAGTTGGGCAGTCATGGGCCAACCTATTTTGAACGTTATCCGGCGCAGGAA
AAAATCTTCAGCCCCACCTGTGATAGCAACCAGATTCAGAAGTGCAGCAACGAAGCGCTGACCAACACTTACGACAACAC
GCTGGTCTACACCGATCGGATGCTGGGCAAAACCATCGATTTGTTGCAACGCTATTCGGGGAAACGTGATGTAGCCATGA
TCTACCTTTCCGATCACGGTGAGTCCTTAGGAGAGCGCGGGATCTACCTGCATGGCACGCCTTACCTGATTGCGCCTAAA
GAGCAAACGCAGGTGCCCATGGTGATGTGGTTCTCACCGAAATTTGCGCAAGATGCTGGTTTCAATCTTGCCTGCCTGCG
TAACAACGCGGACAACAAAGATTACAGTCACGACAATTTTTATCACTCCATGCTGGGCTTATTTGGTGTTCACAGCCGCG
TATACCAACCCGAACTGGATGTGTTTTCGCCATGTCGTGAGGCGATTTGA

Protein sequence :
MFQRLSSLRLNPVQLTWVAALFFTTIGNVGLWQMLWSKVEINSLHSLLFFISLPVFFFCLINLLLTPVLALPYVRKPLLA
LLVVISASCSYFMFNYNVLIDRSMVQNVFETNQAELASYFSIPLLLTILVLGVLPAAVMVCLPTKQTEHPLQNALWWLGN
VLVTFVVLAAVTMLFYKDYASLLRNNLQIRDQVLPFNFVRNTNGYLKRYLKRTTSQLLRTVAEDATRPETRERPKLVIAV
VGETARAQNFQLNGYPRATNPSLSQRENIISFKNVSSCGTATAISLPCMFSRMTRTQYDEVRAATEENLLDILRRTGVQI
LWRNNNNGGCKGVCERVPTDDMPILKITEQCVNKDGTCYDDVLLHQLSSRIDAMSGDALIVLHQLGSHGPTYFERYPAQE
KIFSPTCDSNQIQKCSNEALTNTYDNTLVYTDRMLGKTIDLLQRYSGKRDVAMIYLSDHGESLGERGIYLHGTPYLIAPK
EQTQVPMVMWFSPKFAQDAGFNLACLRNNADNKDYSHDNFYHSMLGLFGVHSRVYQPELDVFSPCREAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 3e-96 42
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 3e-96 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_2128 YP_003017703.1 sulfatase BAC0485 Protein 4e-105 43