Gene Information

Name : PC1_2060 (PC1_2060)
Accession : YP_003017637.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : 2,4-diaminobutyrate 4-transaminase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0160
EC number : -
Position : 2365440 - 2366822 bp
Length : 1383 bp
Strand : -
Note : TIGRFAM: 2,4-diaminobutyrate 4-transaminase; PFAM: aminotransferase class-III; KEGG: eca:ECA2243 diaminobutyrate--2-oxoglutarate aminotransferase

DNA sequence :
ATGACGGATAAAGTCCGTATTGACAGTTTAGGTGCGAATTCATTAACCGGAAACAATGAAACCTATTTGGCAAGACAAGC
TGAATTTGAATCGAACGTGAGGAGTTATCCACGCAAATTGCCTCTGGCAATTGCGAAAGCTGAAGGCGTGTGGATCACTG
ATGTTGAGAATAATCAATATCTTGATTGTCTGGCGGGTGCGGGTACGCTCGCGCTGGGGCACAACCATCCTGACGTGCTG
CAAAGCATCCAAAGTGTCATTACTAGCGGCTTGCCGTTACATACACTTGATCTGACAACGCCGTTGAAAGATCAGTTCTC
CGAATACCTGCTTTCCTTATTGCCTGGCCAAGGCAAAGAGTACTGCCTCCAGTTTACGGGCCCGTCTGGCGCCGATGCGG
TTGAAGCCGCGCTGAAACTGGCAAAAAAATACACTGGCCGTTCTGGTGTGATCAGCTTCTCCGGCGGCTATCACGGCATG
ACGCATGGCGCGCTGTCCGTAACCGGTAACCTGTCTCCGAAAGAAGCCGTCGACGGCATGATGCCTGAAGTCCAGTTTAT
GCCTTACCCGCATCAATACCGCTGCCCGCTGGGCATTGGCGGTGAAGCTGGCGTTAAAGCATTAACCTACTATTTCGAAA
ACCTGATCAACGACGTTGAGAGTGGCGTACGCAAACCGGCGGCTGTCATTCTGGAAGCCGTTCAGGGTGAAGGCGGCGTT
AACCCGGCACCTGCCGAGTGGTTACAGCGCATCCGTAAAGTGACGCAGGAACACGGTATTCTTCTGATCATCGACGAAGT
TCAGGCTGGTTTTGCTCGTACCGGTAAATTCTTCGCCTTTGAACACGCCGGCATTGAGCCCGATATCATCGTGATGTCCA
AAGCCGTTGGTGGCGGTTTGCCATTAGCCGTATTGGGTATCAAGAAGCAGTTCGATGCCTGGGCACCGGGTCACCACACG
GGGACTTTCCGCGGTAACCAACTGGCGATGGCAACCGGCCTGACGACGCTGAAGCACCTGAAAGATAATCAGGTGGCAAA
CAAAGTCGCCGAGCAAGGTGAATGGCTGAAAGCCAAACTGGCTGAGCTGCAAAAACGCTATCCGGTGATCGGTCACATTC
GCGGTCTGGGATTAATGATCGGGATTGAGATTGTTAAACCTGGCGAAGCGCAGGATCACATGGGTTGCTATCCGGCTGAC
GGCGAGCTGTCTGCCCTGTTGCAGAAAAAATGCTTTGAATCAGGCCTGATTCTGGAGCGCGGTGGCCGTAACGGTTGCGT
TCTGCGTCTGCTGCCTTCCCTGCTGATCAGCAATGCTGAATTGGAAATCTTCCTGGATAAATTTGAAAACGCCCTGCTGT
CTGCTGGCGTGAAGCCAGTCTGA

Protein sequence :
MTDKVRIDSLGANSLTGNNETYLARQAEFESNVRSYPRKLPLAIAKAEGVWITDVENNQYLDCLAGAGTLALGHNHPDVL
QSIQSVITSGLPLHTLDLTTPLKDQFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAALKLAKKYTGRSGVISFSGGYHGM
THGALSVTGNLSPKEAVDGMMPEVQFMPYPHQYRCPLGIGGEAGVKALTYYFENLINDVESGVRKPAAVILEAVQGEGGV
NPAPAEWLQRIRKVTQEHGILLIIDEVQAGFARTGKFFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKQFDAWAPGHHT
GTFRGNQLAMATGLTTLKHLKDNQVANKVAEQGEWLKAKLAELQKRYPVIGHIRGLGLMIGIEIVKPGEAQDHMGCYPAD
GELSALLQKKCFESGLILERGGRNGCVLRLLPSLLISNAELEIFLDKFENALLSAGVKPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01505.1 diaminobutyric acid aminotransferase Not tested PAGI-1 Protein 7e-56 41